Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01619 ATGGCGATGAAGTCAGGGTCACTGAATTACTGGAGAGATTATTTCAGGACTGCAAGTTATGATATATTTGATATAATTGAGCATGCGATTAAGGTGGCTGCTTCTGATTGTCCAAAAGAATTCAGAATGCAGCGGGATCGAATTGCGGAGCTTCTTTTCTCCGCTAAATTGACTCATTGTTCTGGTTGTGACCGACTTCAGTTGGCAGTGCCTGCTGACGACGACGAAGAAGATGATGGAGGTTGTAAAAGTGGTTTGGACAGAGATGGTGGTGAATTTGAGACTGGGGCTAGTAAAGAGAGCAAGGCCGACAGTGTCAGAGATGATCATGGAGACATAAATGTGAACCAAGGTTTTAGCAATTTTAGCTATGGCGAAGCTGAGGCACTGACTGATGAGATTGAAGAGGAGTCTCAAGTTGTTGTGGAGGTTTTGAGAATCAAAGAGATTCTCTGCAATGGTGAAGAAGAGTCCCATTCGGTAATATTTGAGTCATTGAGGAGGCTTCAGTTGATGGCTCTAACCGTGGATATTCTGCAGGAAACTGAGATTGGGAAGGTTGTCTCTTGTCTTCGCAAGCATAAATCCAAGGAGATTCGCAGTCTTTCTAAGACACTCTACATTGGGTGGAAAGCATTGGCGGAGGAGTGGCTCAAAGCTACAACAACTGTTGCAGCTTCAGAAGGCACTCCGGAATCTGTTAACCCATCTTTGGTGGACGAGGAAGAAGGGCTTCCTTCACCTCCTATGGATGAAGCCTTTTTTGCCACTCAAACTGGTGCAATTGATATCTCCCAGTTCTTCGATGGCATGGATGACGATGGAAATCCTCGAAGCAGCGAGGAACACATCAAGAACCGTGATAAAGGAAGAAAAGCGGCACTTGATGATCAAAACATGATAAAGAAGAACCAACAATGTTCTCGTGAAATCAACGTTACTTTAAATGACAACAGAAGTCATCAAATAAGGAAACAAGAGATTGGTGCTAACCTAAACAAAGCGGCAAATCGATTAAGACAAGAAAAATTGTCTAATACTGATTCAGGACCAGGAAGACCACCAAAGTTGGTAAAAGAACAAAAACAACGTAGTGATATCCTTATCCAGAAAAGTGTCGATAAGACAGACATCCAACAGACGCCTTCATCTGTTTGGCAAGATAAGTTCAAATGCTCTGAGGAGGACGTCGTGCAAATGAAGCTAGAAGCGACAAAGAGAAAACTTCATGAAAGCTACCAACAAGTTGAGAAAGCCAAAAGGCAGCGGACAATACAAGTTATGGAGTTGCACGATCTCCCAAAGCAAGGGATGGGACATAGGAATATGCATGTGAAACCCGGAAGCCATAATCGAAACTGGTCTAATGGAAGACGCTAG 1380 0.4341 MAMKSGSLNYWRDYFRTASYDIFDIIEHAIKVAASDCPKEFRMQRDRIAELLFSAKLTHCSGCDRLQLAVPADDDEEDDGGCKSGLDRDGGEFETGASKESKADSVRDDHGDINVNQGFSNFSYGEAEALTDEIEEESQVVVEVLRIKEILCNGEEESHSVIFESLRRLQLMALTVDILQETEIGKVVSCLRKHKSKEIRSLSKTLYIGWKALAEEWLKATTTVAASEGTPESVNPSLVDEEEGLPSPPMDEAFFATQTGAIDISQFFDGMDDDGNPRSSEEHIKNRDKGRKAALDDQNMIKKNQQCSREINVTLNDNRSHQIRKQEIGANLNKAANRLRQEKLSNTDSGPGRPPKLVKEQKQRSDILIQKSVDKTDIQQTPSSVWQDKFKCSEEDVVQMKLEATKRKLHESYQQVEKAKRQRTIQVMELHDLPKQGMGHRNMHVKPGSHNRNWSNGRR* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01619 459 MobiDBLite consensus disorder prediction 72 112 - -
Pte6g01619 459 MobiDBLite consensus disorder prediction 226 247 - -
Pte6g01619 459 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 143 225 IPR035441 -
Pte6g01619 459 MobiDBLite consensus disorder prediction 268 293 - -
Pte6g01619 459 MobiDBLite consensus disorder prediction 355 371 - -
Pte6g01619 459 CDD TFIIS_I 145 215 - -
Pte6g01619 459 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 5 447 IPR044805 -
Pte6g01619 459 MobiDBLite consensus disorder prediction 274 293 - -
Pte6g01619 459 SMART TFS2_5 141 216 IPR003617 GO:0005634
Pte6g01619 459 ProSiteProfiles TFIIS N-terminal domain profile. 142 217 IPR017923 -
Pte6g01619 459 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 132 227 IPR035441 -
Pte6g01619 459 Coils Coil 402 422 - -
Pte6g01619 459 Pfam TFIIS helical bundle-like domain 166 213 IPR017923 -
Pte6g01619 459 MobiDBLite consensus disorder prediction 436 459 - -
Pte6g01619 459 MobiDBLite consensus disorder prediction 81 111 - -
Pte6g01619 459 MobiDBLite consensus disorder prediction 342 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01619 Pte-Chr6 33590509 33594476 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pte6g01619 Med26 4.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01619 - - zju:107431544 572.392