Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01617 ATGGCTACAAGAGCAGTGGTTCCTCAACAAGAAGCCGGAGCAGTTGGAGATGATAAGCAGCCCAAGAATATTGGTGGGGCTCAGCCCAGGAACCGTAGAGCACTAGGAGACATTGGAAATTTGGTGAGCGTAAGAGAAGTTGAAGCTAAGGCTAATCGACCCATCACAAGATGTAGTAAGCTTACTTTTGAGGACTCTGATCATGGCCTTAGGAGTTTTCGGGCACAACTACTTGCAAACGCACAAGCAGCAGCAGTTGTCGAAAAGAACAAGAAGCAGCTTTATCCCAATGTCGATATTCCTGCTACTTTAGGAGCTCCTGCTCCTGTTGATGGAGATGCTAAAAAGGATGAGGCACCAAAGGTTATTAAGAAGAAACCTACAGCGAAGCCAAAACCAGCGGAACTCATTGAGATTAGTCCGGATACAGAATCAGAAATCAAGAAAGAGAAGTCATTAAAGAAGAAAAAGGAGAAAGATTCTCGTACTCTTTCTTCAGTACTGACTGCCAGGAGCAAAGCTGCATGTGGACTGACCAATAAACCGAAGGAAAAGATTGTTGATATTGATACAGCTGACGCGGGTAATGAGTTGGCTGCTGTGGAATACATTGAAGACCTTTACAAGTTCTACAAGTTGGCTGAGAATGAGAACCGTCCTCGCGATTACATGGACTCGCAGCCTGAGATCACTGACAAGATGAGAGCAATACTTGTTGATTGGCTGATTGATGTGCATAGCAAGTTCGACCTCTCAGATGAGACACTCTATCTGACCATCAACATTGTTGATAGGTTCCTCGGACTTAAGACTGTGCCAAGGAAGGAGCTACAACTGGTTGGCATCGGTGCAATGTTGATAGCCTCTAAGTATGAAGAAATCTGGCCGCCTGAGGTTAATGATTATGTGTGCCTTTCAGACAGAGCTTACTCTCATGAACATATACTGCGCATGGAGAAAGTCATACTAGGCACGGTTGAATGGACTTTAACCGTGCCCACCCCATATGTTTTCCTTATTCGTTTCATCAAGGCCTCCATTCCTGATCAAATTTTGGAACACATGGTCCATTTTCTTTCTGAACTGGGAATGATGCAATATGCCACCACAAGGTTCTGCCCATCATTGGTTGCTGCCTCAGCAGTCTTTGCCGCTCGATGCACTTTTAACCAGAGCCCTGCTTGGAATGAGACACTCAAGCTGCACACTGGTTACACAGAAGAGCAGCTAATGGATTGTGCTAGACTGTTGGTGAGTTATCATTCCATGGCTGCAAGTAGCAAGCTCCAGGTAGTGTATAGGAAGTACTCAGACATAGACAAAGGAGCTGTGGCTCGGCTTCCACCAGCAAAAAACCTATTGCCTGGCTGTTCTTCCTAG 1380 0.4551 MATRAVVPQQEAGAVGDDKQPKNIGGAQPRNRRALGDIGNLVSVREVEAKANRPITRCSKLTFEDSDHGLRSFRAQLLANAQAAAVVEKNKKQLYPNVDIPATLGAPAPVDGDAKKDEAPKVIKKKPTAKPKPAELIEISPDTESEIKKEKSLKKKKEKDSRTLSSVLTARSKAACGLTNKPKEKIVDIDTADAGNELAAVEYIEDLYKFYKLAENENRPRDYMDSQPEITDKMRAILVDWLIDVHSKFDLSDETLYLTINIVDRFLGLKTVPRKELQLVGIGAMLIASKYEEIWPPEVNDYVCLSDRAYSHEHILRMEKVILGTVEWTLTVPTPYVFLIRFIKASIPDQILEHMVHFLSELGMMQYATTRFCPSLVAASAVFAARCTFNQSPAWNETLKLHTGYTEEQLMDCARLLVSYHSMAASSKLQVVYRKYSDIDKGAVARLPPAKNLLPGCSS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01617 459 Gene3D - 220 331 - -
Pte6g01617 459 PANTHER CYCLINS 157 438 IPR039361 -
Pte6g01617 459 Gene3D - 206 445 - -
Pte6g01617 459 SMART Cyclin_C_2 333 450 IPR004367 -
Pte6g01617 459 CDD CYCLIN_AtCycB-like_rpt1 183 328 - -
Pte6g01617 459 Pfam Cyclin, N-terminal domain 207 330 IPR006671 -
Pte6g01617 459 MobiDBLite consensus disorder prediction 1 34 - -
Pte6g01617 459 PIRSF Cyclin_A_B_D_E 1 459 IPR046965 GO:0016538|GO:0044772
Pte6g01617 459 MobiDBLite consensus disorder prediction 104 134 - -
Pte6g01617 459 ProSitePatterns Cyclins signature. 235 266 IPR006671 -
Pte6g01617 459 SUPERFAMILY Cyclin-like 332 451 IPR036915 -
Pte6g01617 459 FunFam G2/mitotic-specific cyclin 219 326 - -
Pte6g01617 459 SMART cyclin_7 337 419 IPR013763 -
Pte6g01617 459 SMART cyclin_7 240 324 IPR013763 -
Pte6g01617 459 SUPERFAMILY Cyclin-like 196 330 IPR036915 -
Pte6g01617 459 MobiDBLite consensus disorder prediction 111 134 - -
Pte6g01617 459 FunFam G2/mitotic-specific cyclin-1 327 445 - -
Pte6g01617 459 CDD CYCLIN_AtCycB-like_rpt2 333 449 - -
Pte6g01617 459 Pfam Cyclin, C-terminal domain 333 449 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01617 Pte-Chr6 33580970 33583324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01617 1 459 Core Cell Cycle Gene Families AT4G37490 51.599 2.97e-141 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01617 K21777 - qsa:O6P43_006333 566.614