Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01615 ATGAGGGAGGAGGACTCCAATTGGTTTTCAACATGGGAAGAACAGCTTCCTTCCCCCGAGGAACTCATGCCTCTCTCTCAAAACCTAATCACTCCTGATCTTGCTTTGGCTTTTGACATCAGAAACCCAACCTACAATCACAACCGACATCCCCTTCATACCAATGATAACAATTTCCATATGAACAGTAACAATAATCATATCAAAAGCAGCAGCAGCCCTCAGCAGCAAACAACCCCACCACCACATCCTCCTACTAATAGTTCTTTACCTTCTCCTGGCAATCCAAGCCCACAGCAACCCAATTCATCGGAGATTGCAGATTCCGGTGAATTCGGATCTGGTACTGCTGGTGATGAGCCTGCTAGGACGCTCAAGAGACCGAGGTTGGTTTGGACTCCGCAACTTCACAAGAGGTTTGTGGATGCTGTGGCTCACTTGGGTATAAAAAATGCTGTACCCAAGACTATAATGCAGATGATGAGTGTGGATGGGTTGACCAGAGAGAACGTAGCTAGTCATTTGCAGAAATATAGGCTTTATCTCAAACGCATGCAGGGATTGTCCGGTGGTGGTGGAGGAGGAGCAGCTGCTGCCTTGGCTGCTTCGGCAGATCCTGCCACGGACCATTTGTTTGCAAGCTCACCGGTTCCACCCCATTTCTTGCATCCCGGTCGCTCAAATTCCGATCATTTCTTGCCGTTTGTATCTGTGCCAGCTATACCACACCACCATCAACAGCCGATGGCAGTGGCCAGGCATCCTCAATTGCAACCGCAGCACCATAGGCAGATGGGGCATTTTGGGTCGCCTCCAAATGGGCATTTTGAGCATCCTTTCCTGGGCAGACAATCTCAGCAATTTCACAGAATGGGTGCACCAGTACATAGTCCAGTACCTAACTATGTAGAGGACATGGAGTCAGCTAACGCAGCTGGAGGGAGAAAGGTTCTTACTTTGTTTCCAACTGGCGATTATTGA 981 0.4883 MREEDSNWFSTWEEQLPSPEELMPLSQNLITPDLALAFDIRNPTYNHNRHPLHTNDNNFHMNSNNNHIKSSSSPQQQTTPPPHPPTNSSLPSPGNPSPQQPNSSEIADSGEFGSGTAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQMMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAAAALAASADPATDHLFASSPVPPHFLHPGRSNSDHFLPFVSVPAIPHHHQQPMAVARHPQLQPQHHRQMGHFGSPPNGHFEHPFLGRQSQQFHRMGAPVHSPVPNYVEDMESANAAGGRKVLTLFPTGDY* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01615 326 MobiDBLite consensus disorder prediction 77 98 - -
Pte6g01615 326 MobiDBLite consensus disorder prediction 47 126 - -
Pte6g01615 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 183 IPR017930 -
Pte6g01615 326 NCBIfam myb-like DNA-binding domain, SHAQKYF class 128 180 IPR006447 GO:0003677
Pte6g01615 326 Gene3D - 124 186 - -
Pte6g01615 326 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 302 IPR044841 GO:0003700|GO:0006355
Pte6g01615 326 SUPERFAMILY Homeodomain-like 124 184 IPR009057 -
Pte6g01615 326 Pfam Myb-like DNA-binding domain 131 179 IPR001005 -
Pte6g01615 326 MobiDBLite consensus disorder prediction 47 76 - -
Pte6g01615 326 FunFam Two-component response regulator 123 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01615 Pte-Chr6 33567217 33569322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01615 1 325 G2-like Transcription Factor Family AT3G10760 55.738 8.39e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte6g01615 Myb_DNA-binding 1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01615 - - jre:108983410 432.95