Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01612 ATGGAGGAAATTGGATTTATCCAGAGGTGTAAGCCTTACATAGCTATGATCTCTCTGCAATTTGGGTATGCGGGGATGAACATAATCACTAAGGTATCCCTCAACCGTGGGATGAGCCATTACGTTCTTGTAGTTTATAGGCATGCCTTTGCAACAGCAGCAATTGCACCATTTGCTCTTGTCCTTGAGAGGAAAGTGAGACCGAAGATCACGTTTCCAATTTTCATGCAAATATTTGTGCTGGGTCTTCTGGGTCCAGTGATTGATCAGAACTTTTACTACGCTGGATTAAAATTTACTTCACCAACTTTCTCATGTGCCTTGAGTAACATGCTCCCTGCAATGACATTCGTCATGGCAGTTATCTGCAGGATGGAGAAATTGGACTTGACGAAAGTAAGATGCCAAGCAAAGCTGATTGGAACCATTGTAACAGTTGCTGGCGCCATGTTGATGACGTTGTACAAAGGAGAAGTCATCAATTTTTTCTGGACTGAGCATCTCAGTCATATTACATCCCAAAGCTCTAATGTTACTGTAGGATCCACAGACAAGGATTGGTTTAAGGGTTCTATTCTCCTCATCATGGCTACCTTTGCATGGGCTTCTTTCTTCATTGTTCAGGCAGTGACATTGAAAAGATACACAGCTCAGCTATCTCTCACTGCACTTGTGTGTTTCATTGGGACCCTGCAATCAATTGCCGTGACATTTGTTATGGACCATAGTCCTTCTCTTTGGACAATTGGCTGGGACATGAATCTCCTTGCTGCTGCTTATGCTGGCATAGTGTCATCAGGCATAGCCTACTATGTTCAAGGAATTGTCATGCAAAAAAGAGGGCCAGTTTTTGTTACTGCTTTCAGCCCCCTTATGATGATTATTGTCGCCATCATGGGTTCCTTCATCCTCGCTGAAAAAATATACCTTGGAGGAGTACTTGGTGCTGCTTTGATTGTCATGGGGCTCTATTCAGTTCTCTGGGGAAAATACAGAGAGTATAAGGAGAAGGAAGAAGAAATAATCCCAGAGGCGGTCAAGGCAGGAGTTGCTGAAAATGGCAGGATGACTACGTTGATGGAAGACATGGAAGACGTTGACATTGAAATGCAGAAGTGTGAAAATCACAAGCAGCAAATGGCCGTCGCTGTGGTGGCAATCGGTGTCCCAATTCCTCAGCGGCCAATGGTCTCCGTTGAAACTCCTAAACCCTAA 1215 0.4403 MEEIGFIQRCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFPIFMQIFVLGLLGPVIDQNFYYAGLKFTSPTFSCALSNMLPAMTFVMAVICRMEKLDLTKVRCQAKLIGTIVTVAGAMLMTLYKGEVINFFWTEHLSHITSQSSNVTVGSTDKDWFKGSILLIMATFAWASFFIVQAVTLKRYTAQLSLTALVCFIGTLQSIAVTFVMDHSPSLWTIGWDMNLLAAAYAGIVSSGIAYYVQGIVMQKRGPVFVTAFSPLMMIIVAIMGSFILAEKIYLGGVLGAALIVMGLYSVLWGKYREYKEKEEEIIPEAVKAGVAENGRMTTLMEDMEDVDIEMQKCENHKQQMAVAVVAIGVPIPQRPMVSVETPKP* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01612 404 PANTHER WAT1-RELATED PROTEIN 12 334 IPR030184 GO:0016020|GO:0022857
Pte6g01612 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 332 - -
Pte6g01612 404 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Pte6g01612 404 Pfam EamA-like transporter family 13 153 IPR000620 GO:0016020
Pte6g01612 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01612 Pte-Chr6 33547268 33549809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01612 1 393 Nodulin-like Gene Family AT5G07050 63.930 3.01e-178 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01612 - - jre:109021862 622.468