Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01609 ATGGAACTGTTTTCTCTACAGTCTTGGCTTTTCCTCGGCTTTGTCTCTCTATCTATCTACCTCTACATCTACTTGTTTTCTTCATCCATAACTCCCAACAGCAAAGGCTTCAAAAATTATCCTATCATTGGAGCTTTGCCTGGATTAGTACAAAACGTTCACCGCATCCTTGATTGGACCACCCAAGTCCTTGCCGACTGTCCCACCCAGTCCGCCTGCTTACGCCGCCCTGGAAATGTTCCAACTATCCTCACGGCAGACCCACAAAATGTGGAGTATATGCTCAAGTCCAACTTTGAGAACTACCCGAAAGGCCCTCAGACCATTTCTCTCCTTGAAGACTTGTTTGGCAGGGGCATCTTCAACTCAGATGGTGAACTCTGGAAACTCCAAAGAAAAACCGCCAGCTATGAATTCAACACCAAGTCTCTGCGAAACTTTGTCGTGGAGAATGTTGGTTTGGAAATTCAGACCAGATTGCTTCCGGTTCTCTACGAAGCTTGTAAAACGAAAAGGGTGGTCGATTTACAGATCATCTTGGAGAGGTTTGCCTTCGACAACGTGTGTAAGCTTGCCTTTAACGTCGACACTGGATGTCTTGGTGGGGATGAAACCAAAGGAGCAAAGTTCATGGAGGCCTTCGAAGATGCAGCAAACATCATAGCTGACAGATTTGCCTATGTTATTCCGTTGTTTTGGAAGGTCAAGAAATTCCTCAACATTGGAACAGAGCGAAGGTTGAGTAAATCCATACGGATCATCCATCACTTTGCAGATGATATCGTTCGCTCCAGAATGCACGCCAGAGATGCTGATTCTTATCAAGATTTGTTATCTCGTTTCATTGAGAATGAAGGCAATCATTCACCTGAATTTCTCAGAGACATTGTTATAAACTTCATACTAGCTGGCAGGGACACCACATCAGCAGCGTTAACCTGGTTCTTTTGGATCCTATCATCAAGACCTGACATCAAGAAAAACATTTTGGATGAGCTTCGTTTGATTCGTGCAAAGAGACTGAACAGCAGTGACAAAATGGATTATAGCTTTGACGAGTTAAGAGATATGCCTTATTTGCATGCGGCGATTTCTGAAACCATGAGGCTGTACCCTCCCGTAGCAATGGATACCAAGACATGTTTAAAGGATGATGTCTTGCCTGATGGTACAGTGGTTAAGAAGGACTGGTTGCTGTCCTACCATACATATGCAATGGGGAGGATGGTGGGTATATGGGGAGAAGATTGCTATGAGTATAAACCAGAAAGGTGGCTGGAGAATGGGGTGTACAAACCAGAAAGTCCATTCAGGTTCCCAGTGTTCCATGCTGGACCAAGAATGTGTCTGGGCAAGGATTTGGCCTATGTTCAGATGAAGGCAATAGTGGCAACAGTGATTGAGAGGTTTGACATGGAGGTGGAAGAGATAGCAAAGCGTCCTGAGTATTTGATGTCTGTGACTCTCAGGATGAAAGGAGGATTGCAAGTGAAAGTGAAGGAAAGAGATGGTGTGGACTCGTGA 1524 0.4475 MELFSLQSWLFLGFVSLSIYLYIYLFSSSITPNSKGFKNYPIIGALPGLVQNVHRILDWTTQVLADCPTQSACLRRPGNVPTILTADPQNVEYMLKSNFENYPKGPQTISLLEDLFGRGIFNSDGELWKLQRKTASYEFNTKSLRNFVVENVGLEIQTRLLPVLYEACKTKRVVDLQIILERFAFDNVCKLAFNVDTGCLGGDETKGAKFMEAFEDAANIIADRFAYVIPLFWKVKKFLNIGTERRLSKSIRIIHHFADDIVRSRMHARDADSYQDLLSRFIENEGNHSPEFLRDIVINFILAGRDTTSAALTWFFWILSSRPDIKKNILDELRLIRAKRLNSSDKMDYSFDELRDMPYLHAAISETMRLYPPVAMDTKTCLKDDVLPDGTVVKKDWLLSYHTYAMGRMVGIWGEDCYEYKPERWLENGVYKPESPFRFPVFHAGPRMCLGKDLAYVQMKAIVATVIERFDMEVEEIAKRPEYLMSVTLRMKGGLQVKVKERDGVDS* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01609 507 Gene3D Cytochrome P450 25 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte6g01609 507 PANTHER CYTOCHROME P450 24 497 - -
Pte6g01609 507 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte6g01609 507 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte6g01609 507 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte6g01609 507 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte6g01609 507 SUPERFAMILY Cytochrome P450 32 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte6g01609 507 CDD CYP86A 74 495 - -
Pte6g01609 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Pte6g01609 507 Pfam Cytochrome P450 36 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte6g01609 507 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte6g01609 507 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte6g01609 507 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte6g01609 507 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte6g01609 507 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01609 Pte-Chr6 33538273 33539796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01609 36 502 Cytochrome P450 AT3G56630 61.277 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01609 - - qsa:O6P43_006322 682.559