Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01602 ATGGCATCTGATTCCTGGATGCGAGAATATAATGAGGCATCAAAGCTTGGGGATGAAGTCAATGGTATGATTTCCGCAAGGAGTTCATTTCCCCACTCAGGACCGGAGAAGCAGCGCCATCTGTCAGCTGCTCGAAGAAAGATAACAATACTGAGGACCAAGCTTGAAACCTTACAGTCACTTCTAGAAACACTGCCTAGCAAGCAGCAGATAACAGCCAAAGAGATGAACCGAAGGAACGACCTGCTCACAAATTTAACTTCAAAAGCCAACCAGATGGCCGCTACTCTCAACATGTCTGGTCTTGCCAACAAAGAAAGCTTGCTTGGTCCCGATAACAAGTCAGATGAGGTCATGAAGAGGACAACTGGCTTGGACAATCAGGGTCTTGTTATATTTCAACGGCAAATCATGAAAGAACAAGATGATGGCCTCGAAAAGTTGGAAGAGACAGTGATGAGTACAAAGCACATAGCATTAGCAGTCAATGAAGAGCTTAATCTCCATACGACCCTATTGGATAATATAGACCAGCATGTGGATTTAACAGAATCCCGCTTACAGAGGGTGCAAAAACAACTGGCCATGTTGAATAAGCGCACTAAAGGTGGTTGCTCTTTCTTTATCCTGCTGGTTCTAGCTATTGTGATTATGATAGTTATCGCATGGGTGCTGATCAAGGATTTGTAG 690 0.4406 MASDSWMREYNEASKLGDEVNGMISARSSFPHSGPEKQRHLSAARRKITILRTKLETLQSLLETLPSKQQITAKEMNRRNDLLTNLTSKANQMAATLNMSGLANKESLLGPDNKSDEVMKRTTGLDNQGLVIFQRQIMKEQDDGLEKLEETVMSTKHIALAVNEELNLHTTLLDNIDQHVDLTESRLQRVQKQLAMLNKRTKGGCSFFILLVLAIVIMIVIAWVLIKDL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01602 229 SUPERFAMILY SNARE fusion complex 126 197 - -
Pte6g01602 229 Coils Coil 173 200 - -
Pte6g01602 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 135 197 IPR000727 -
Pte6g01602 229 SMART tSNARE_6 130 197 IPR000727 -
Pte6g01602 229 FunFam syntaxin-51 isoform X2 137 199 - -
Pte6g01602 229 PANTHER SYNTAXIN 38 217 IPR045242 -
Pte6g01602 229 Coils Coil 41 61 - -
Pte6g01602 229 Gene3D - 137 199 - -
Pte6g01602 229 CDD SNARE_Qc 138 195 - -
Pte6g01602 229 Pfam SNARE domain 171 221 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01602 Pte-Chr6 33497456 33501074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01602 2 230 SNARE and Associated Proteins AT1G79590 59.307 1.13e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01602 K08503 - mof:131160253 327.405