Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01575 ATGGGTTACGTAGTTTTCCTCAACATTTCATTTGTCCTAGTAGCATGCGTGTTAATGATCGTTCATTTCGACTCTCCTGACCATTCCTTTTTCGTTAGCAACCACCTTCGAGCCTTCGGGTATGGGAGTCATCTGCAGGGGTGTGAGGGACTACACAACCTTGAAGGGTACGAAGCCAAATGTTTGTACGTGAAATCCGATCACCACTGCGTCTCTCAGGGCTTTATTGATTACCTTTACCTTTTTTACTGCAATTTTGGGAATATTCCTTTTTTGGGTTACAGTATTTTGTTCCTGTGGCTTCTCGTTCTGTTTTATGTGCTTGCAAATACAGCTTCTGAATATTTCTGCCCTTCACTTGAACAATTGTCTAAACTGTTGAAGCTATCTCCTACAATTGCTGGTGTCACGCTGCTGTCTCTTGGCAATGGAGCTTGTGATGTCTTTGCCAGCTTTGTGTCGTTCAAGAGTTCTGGAACTCGTGACATTGGATTTAATACAATTATTGGGGGCGGTTCGTTTGTCTCATGTGTGGTTGTTGGAGTTATTAGCATTTGTACACGCCGTAGAAATATTCGAATTTGTAAGTATGCTTTTGTAAGAGATGTTTGTTTCTACTTTCTGGTTCTTCTGTGCTTGATTATGATATTGGTTACTGGAGAGATCAATGTTTGGGGAGCAGTTGGATATTCATCGATTTATCTTGTCTATGCTGCTTCTGTCATTTGCGTTTCGGATTCACGCTTGAAGAGTTTCCTGGGTGAAAATCGTAGTTGTTCTAATTCAAATTGCGATGACAGTAATTTGAGGATACCAATTATTTCTTGTGTGGAAAAAGAGGAAGTTGATTCTGATGAAAATGGAGCTCAAGGGTGCGAATCTGGAGTCACAGTCAAGAATAGATGCTCTTGGATTAGATCTTCTTCATTTGATGTGTCAATCTGCATTCTTGGTTTGCCTCTCGATCTACCTAGAAGGCTGACAATTCCTGTTATTTGTGAGGATAGATGGTTTAAGCCATATGCAGTGTTGTCGGTGACATTAGGACCTGTTTTATTTTCATTCCTGTTGAACCCTTACAAAGAAGGTGACCACTTTGGTGCGAGCATGGTTGTTTGTGGAATTGGATTGACAATCGGTTTTGCTTTAGGTTTCGTTGCATTTCTGAAAGTTGAGAAGTCAAGCCCTCCAAAGAGATGCCAATTTCCTTGGCTTGCAGGAGGATTCATGATGAGTGTGACATGGAGTTACATCACTGCCAACGAATTGGTGGGATTGATGGTTTCACTTGGTTATATATGTGGTATTAGCCCTTCCATTCTGGGGTTGACAGTCCTTGCCTGGGGTAATTCACTTGGTGATTTGATGACCAATTTAACAATGGCTTTGAAAGGAGGCAAGGAAGGTGTTCAGATGGCTATATCAGGATGTTATGCTGGTCCTATCTTCAATACGTTGCTCGGTTTAGGCTTGTCTCTTGTCAATTCCTCTTGGTCAGAGTATCCATCATCTGTTGTAATCGCTGGTGATCCTTATCTTTGGGAGAGTTTGGGGTTTCTGATGGCAGGATTACTTTGGGCACTTGTGATGTTGACTTTGAGGGATACAAGACTTGGCGGTGTACTTGGAGTAGGGCTCTTAGTCATTTATTTGAGTTCCCTGTTTATTAGGTTAATTCAAACTCTTGGTTATTTCAAATACGGTGGTATTTAG 1713 0.4145 MGYVVFLNISFVLVACVLMIVHFDSPDHSFFVSNHLRAFGYGSHLQGCEGLHNLEGYEAKCLYVKSDHHCVSQGFIDYLYLFYCNFGNIPFLGYSILFLWLLVLFYVLANTASEYFCPSLEQLSKLLKLSPTIAGVTLLSLGNGACDVFASFVSFKSSGTRDIGFNTIIGGGSFVSCVVVGVISICTRRRNIRICKYAFVRDVCFYFLVLLCLIMILVTGEINVWGAVGYSSIYLVYAASVICVSDSRLKSFLGENRSCSNSNCDDSNLRIPIISCVEKEEVDSDENGAQGCESGVTVKNRCSWIRSSSFDVSICILGLPLDLPRRLTIPVICEDRWFKPYAVLSVTLGPVLFSFLLNPYKEGDHFGASMVVCGIGLTIGFALGFVAFLKVEKSSPPKRCQFPWLAGGFMMSVTWSYITANELVGLMVSLGYICGISPSILGLTVLAWGNSLGDLMTNLTMALKGGKEGVQMAISGCYAGPIFNTLLGLGLSLVNSSWSEYPSSVVIAGDPYLWESLGFLMAGLLWALVMLTLRDTRLGGVLGVGLLVIYLSSLFIRLIQTLGYFKYGGI* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01575 570 Pfam Sodium/calcium exchanger protein 405 557 IPR004837 GO:0016020|GO:0055085
Pte6g01575 570 Pfam Sodium/calcium exchanger protein 98 240 IPR004837 GO:0016020|GO:0055085
Pte6g01575 570 Gene3D - 129 254 IPR044880 -
Pte6g01575 570 Gene3D - 344 559 IPR044880 -
Pte6g01575 570 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 8 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01575 Pte-Chr6 33270331 33272949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01575 6 563 Antiporters AT5G17850 51.957 5.76e-166 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01575 K13754 - qsa:O6P43_006226 665.996