Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01563 ATGGAGCTAATGGCGGAAAAGAAGGTTGCCGAAAACAACAACAGCGGAGATAACGCGCCGACGACTTTGGATTCAACTGGTACTTCTTCGTTGACATCTGTTGGCGCCGATGGCATTGTTCTCTCGAAAGAAGCCCAAGAGTTTCGCGAACGACAAGCTCGTGACCTCAAAGCTGGCCTTCATCCCCTCAAGTATAAATTTGTACTTTGGTACACACGGCGAACACCAGGAGTTCGCAACACGGCTTCATATGAGGACAACATCAAGAAAATTGTGGACTTCAGCACCGTTGAAGGTTTTTGGGTGATCTATTGTCACCTGGCTCGTCCATCTTCTTTGCCAGTTCCAACTGATTTGCATCTCTTTAAGGAAGGAATCCGCCCATTGTGGGAGGACTCTGCCAACTGCAATGGTGGTAAGTGGATTATAAGATTCAAGAAGGTTGTGTCAGGTCGTTTCTGGGAGGATCTAGTTCTTGCCTTAATAGGTGACCAGCTAGAGTGCGGTGATAACATATGTGGTGCTGTACTAAGCGTTCGATTCAATGAGGACATTCTGAGCGTTTGGAACCGCAATGCATCTGATAATCAGGCCGTAATGTCTCTGAGGGACTCAATCAAACGCCACTTAAAGCTTCCTCATGGATATGTTATGGAATACAAGCCTCACGATGCTTCTCTACGTGATAATTCATCATACAGAAACACTTGGTTGAGAGGGTAG 723 0.4633 MELMAEKKVAENNNSGDNAPTTLDSTGTSSLTSVGADGIVLSKEAQEFRERQARDLKAGLHPLKYKFVLWYTRRTPGVRNTASYEDNIKKIVDFSTVEGFWVIYCHLARPSSLPVPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALIGDQLECGDNICGAVLSVRFNEDILSVWNRNASDNQAVMSLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01563 240 MobiDBLite consensus disorder prediction 11 30 - -
Pte6g01563 240 SUPERFAMILY eIF4e-like 57 236 IPR023398 -
Pte6g01563 240 Gene3D RNA Cap, Translation Initiation Factor Eif4e 39 234 IPR023398 -
Pte6g01563 240 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 38 229 IPR001040 GO:0003723|GO:0003743|GO:0006413
Pte6g01563 240 ProSitePatterns Eukaryotic initiation factor 4E signature. 118 141 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Pte6g01563 240 FunFam Eukaryotic translation initiation factor NCBP 37 233 - -
Pte6g01563 240 Pfam Eukaryotic initiation factor 4E 62 220 IPR001040 GO:0003723|GO:0003743|GO:0006413
Pte6g01563 240 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01563 Pte-Chr6 33163329 33166510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01563 50 241 Eukaryotic Initiation Factors Gene Family AT5G18110 83.854 7.63e-122 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01563 K03259 - qsa:O6P43_009857 409.838