Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01554 ATGCCAGAGTTGAGAAGTGGAGCTCGGAGGTCGAAACGGCTTGGAGAACTTCAGCCTACCCCATTACCTGCTGATCAAATTGAGAATTGGGTACAACCTGCTCAAAACAGAAACCGGAGGAGAGTTGGAGGTGGGAGAGGAAGAGGTGCTAATGCCACAGCTTTAGCAAAAGCTTCTCCTGCAGTACCTTCTAGGCCCACAACAGCTGGTCGAGGCCGAGGGATAAGATTGATAGATCTAGACCCTGAACCTTGCGAGGTCCTTCCTGAACCTGTTGCTTTAGGGGCTCCAGAACCCATCTGCAATCACGTTGAAGTGGCTGGCAACAAAGACATTGCAATGGAGGGTGGAAGTGCGGAGAAGATAGTGGGAGCTGAGGAAGAAGCTACCACAACTCCTGTTCCTGAGAGGGTGCAAGTGGGAAATTCTCCTGTGTATAAGATAGAAAAGAAGTTGGGTAAGGGTGGTTTTGGCCAAGTCTACGTTGGTAGAAGAGTTAGTGGTGGCTCTGATCGAACTGGTCCTGACGCAATTGAGGTTGCTCTGAAGTTTGAGCATAGAAATAGCAAAGGTTGCAATTATGGCCCTCCTTATGAGTGGCAAGTTTACAATACTCTAAATGGGTGTTATGGGATTCCATGGGTTCATTACAAGGGTCGGCAAGGAGACTTTTACATTCTGGTCATGGACATGCTTGGTCCCAGTCTTTGGGATGTTTGGAATTCCCTTGGCCAGTCGATGTCACCAAGTATGGCTGCTTGCATTGCAGTGGAGGCAATTTCAATTCTTGAGAAGCTCCACCAGAAGGGGTTTGTGCATGGAGATGTAAAGCCAGAAAATTTTTTACTTGGTCAACCTGGAACAGCTGATGAGAAAAAGTTATATCTCATCGATCTTGGGTTGGCATCTAGATGGAAAGATGCATCATCCGGTCTACATGTTGATTATGATCAGCGGCCTGATATATTCAGGGGAACAATTCGCTATGCAAGCGTGCATGCACATTTAGGACGCACTGGAAGTCGTAGAGATGATCTTGAGTCGTTGGCTTACACATTAATTTTTCTTATAAAAGGAAGGTTGCCCTGGCAAGGTTATCAGGGCGACAATAAGAGTTTTCTGGTTTGTAAGAAAAAAATGGCTACTTCTCCGGAGTTGATGTGTTGCTTTTGTCCTGCACCCTTTAAGCAATTCCTTGAAGCAGTTACTAACATGAAATTTGATGAGGAGCCAAATTATCCCAAGCTGATATCCTTATTTGAAACACTGATTGAACCTATAGGCCCACTACGACCTATTAGAATTGATGGAGCATTAAAGGTCGGACAAAAACGGGGAAGATTGCTTATAAATCTAGAAGATGATGAGCAGCCAAAGAAGAAAGTGCGTTTAGGAAGTCCTGCTACCCAGTGGATATCAGTGTATAATGCACGCCGTCCCATGAAGCAGAGATATCACTACAATGTAGCTGACAATAGGCTGCGCCAACATGTTGATAAGGGCAATGAAGATGGGCTATACATCAGCTGTGTGGCCTCTGCTTCTAATCTCTGGGCCCTAATCATGGATGCAGGAACTGGTTTCACTTCCCAGGTTTATGAGTTGTCATCAGTATTCCTGCATAAGGACTGGATCATGGAACAATGGGAGAAAAATTACTACATCAGTTCAATTGGTGGTGCAGCAAATGGAAGCTCCTTAGTTGTTATGTCCAGAGGTCGAACACCATACACTCAGCAGTCATACAAAGTGAGTGAATCTTTTCCTTTCAAGTGGATAAATAAGAAGTGGAAAGAAGGGTTTCATGTTACATCCATGGCAACTGCTGGAAGTCGCTGGGGCGTTGTCATGTCTAGAAATGCTGGATATTCTGATCAGGTTGTGGAGCTTGACTTTTTGTATCCGAGTGAAGGAATTCACCGAAGATGGGAGAGTGGTTATCGCATAACTGCTATGGCTGCCACCCCTGATCAAGCAGCCTTGATTCTGAGCATCCCGAAACGTAAGTTGCTTGATGAAACTCAAGAAACTTTGCGTACCTCTGCCTTCCCCAGCACCCATGTCAAGGTAAATGCTCTATAA 2082 0.4529 MPELRSGARRSKRLGELQPTPLPADQIENWVQPAQNRNRRRVGGGRGRGANATALAKASPAVPSRPTTAGRGRGIRLIDLDPEPCEVLPEPVALGAPEPICNHVEVAGNKDIAMEGGSAEKIVGAEEEATTTPVPERVQVGNSPVYKIEKKLGKGGFGQVYVGRRVSGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPSMAACIAVEAISILEKLHQKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASRWKDASSGLHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMATSPELMCCFCPAPFKQFLEAVTNMKFDEEPNYPKLISLFETLIEPIGPLRPIRIDGALKVGQKRGRLLINLEDDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADNRLRQHVDKGNEDGLYISCVASASNLWALIMDAGTGFTSQVYELSSVFLHKDWIMEQWEKNYYISSIGGAANGSSLVVMSRGRTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMATAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITAMAATPDQAALILSIPKRKLLDETQETLRTSAFPSTHVKVNAL* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01554 693 Pfam Protein kinase domain 146 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01554 693 ProSitePatterns Protein kinases ATP-binding region signature. 152 183 IPR017441 GO:0005524
Pte6g01554 693 ProSiteProfiles Protein kinase domain profile. 146 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01554 693 FunFam Casein kinase 1-like protein 118 466 - -
Pte6g01554 693 SUPERFAMILY Protein kinase-like (PK-like) 146 436 IPR011009 -
Pte6g01554 693 PANTHER CASEIN KINASE-RELATED 146 669 - -
Pte6g01554 693 CDD STKc_CK1 146 420 - -
Pte6g01554 693 Gene3D Transferase(Phosphotransferase) domain 1 115 462 - -
Pte6g01554 693 SMART serkin_6 146 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01554 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Pte6g01554 693 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01554 Pte-Chr6 33100187 33104859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01554 263 428 MAP Kinase Kinase Kinase AT5G50180 24.713 8.84e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pte6g01554 Pkinase 1.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01554 - - gmx:100801967 1253.81