Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01541 ATGATCAAGCGACCTGCTCGCCAGGAATCGCTTTCCGACAAGATCCATAACTATCGAGGGGTTTTGATGATCATTGTCATCCCGGTTCTTCTAATCATTTTGGTTATTTTCCTCATGCCGCAAACTTCTCCTGCAGAAACTGTTCAAGACTATGCCATTACTCACCGCAAGTTCTCGCCAAATGACAAACTGGGTTCGCAGTCTTTCGCTGTGATTTTTGATGCTGGAAGCTCGGGCAGTCGTGTACATGTTTATTGTTTCGATCAAAATTTGGATCTCGTTCCAATTGGCAAGGATTTGGAGCTCTTCGTTCAGATTAAGCCTGGTTTGAGTGCATATGCTGATAATCCTCAAGAAGCAGCTGAATCTTTGCTTGAATTATTGGATAAAGCCGAAAGTGTTGTTCCCAGGGATTTAAGGTCTAGGACGGCTGTTCGAGTTGGGGCAACAGCTGGTTTGAGGCAACTGGAAGGTGATGCTTCTGATAAAATATTGCAAGCGGTCAGGGACCTGTTGAAACATAGAAGCACCTTGAAATCTGATGCGAAAGCTGTTACTGTGCTAGATGGAAGCCAAGAAGGATCCTATGAATGGGTGACAATAAACTTCCTATTGGGTAAGCTAGGGAAAAAATACTCAGATACAGTTGGAGTGGTTGATCTTGGAGGTGGTTCTGTCCAAATGGCGTATGCAGTATCAGAGGAGACTGCTGTTGCTGCTCCGAGGGTTTCAGATGGGGAGGATCCATACGTGAAGGAAATGTTTCTCATGGGAAAAAAATACTACCTATATGTTCACAGTTACTTGCGCTATGGTTTACTCGCTGCTCGAGCACAGAGTTTGAAGGTTTCTGATGATTCTAGTAATCCCTGTATCCTATCTGGCTATCAAGGGTCATACAGGTATGGAGGAAAGGACTATAAAGCTGTGGCTGTGGCCTCTGGTGCAAGCTTGGATGAGTGCCGAAGGGTTGCTCTTGATGCTCTCAAAGTGAATGAATCAAGTTGCATGCATATGAAATGCACATTCGGTGGTGTGTGGAATGGAGGAGGAGGGGATGGGCAGAAGAATCTTTTTGTTGCCTCATTCTTCTTTGACAAAGCTGCTGATGCTGGTTTTGCTGATTCCAATGCACCTGTTGTCATAGTTCGTCCGGTAGATTTCCAAGAGGCAGCTAGGCAAGCTTGTGAAACAAACCTTGAGGATGCCAAGTCCACTTTCCCTCGTGTGGACAATGACAACCTCCCATTCTTATGCATGGATCTTGTGTACCAGTATACACTGCTTGTGGATGGATTCGGCCTAGATCCTTGGCAAAAGATTACATTGGTGAAGAAAGTAAAATATCAAGATTACCTGGTTGAAGCAGCGTGGCCCTTGGGCAGTGCAATAGAAGCTGTCTCATAA 1407 0.4506 MIKRPARQESLSDKIHNYRGVLMIIVIPVLLIILVIFLMPQTSPAETVQDYAITHRKFSPNDKLGSQSFAVIFDAGSSGSRVHVYCFDQNLDLVPIGKDLELFVQIKPGLSAYADNPQEAAESLLELLDKAESVVPRDLRSRTAVRVGATAGLRQLEGDASDKILQAVRDLLKHRSTLKSDAKAVTVLDGSQEGSYEWVTINFLLGKLGKKYSDTVGVVDLGGGSVQMAYAVSEETAVAAPRVSDGEDPYVKEMFLMGKKYYLYVHSYLRYGLLAARAQSLKVSDDSSNPCILSGYQGSYRYGGKDYKAVAVASGASLDECRRVALDALKVNESSCMHMKCTFGGVWNGGGGDGQKNLFVASFFFDKAADAGFADSNAPVVIVRPVDFQEAARQACETNLEDAKSTFPRVDNDNLPFLCMDLVYQYTLLVDGFGLDPWQKITLVKKVKYQDYLVEAAWPLGSAIEAVS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01541 468 CDD NBD_sugar-kinase_HSP70_actin 71 230 - -
Pte6g01541 468 FunFam Apyrase 1 189 448 - -
Pte6g01541 468 Pfam GDA1/CD39 (nucleoside phosphatase) family 66 466 IPR000407 GO:0016787
Pte6g01541 468 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 188 203 IPR000407 GO:0016787
Pte6g01541 468 Gene3D - 69 464 - -
Pte6g01541 468 Gene3D Exopolyphosphatase. Domain 2 189 448 - -
Pte6g01541 468 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 468 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01541 Pte-Chr6 32997968 33001334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01541 7 468 Calmodulin-binding Proteins AT3G04080 69.264 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01541 K14641 - qsa:O6P43_006143 701.049