Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01539 ATGGCAACCATGACTCGTGCTATTACGGCAGCCATTGCTGATGCAGTGTTGACATTCATGTGGGTGTTTTGCGCATCAATGATAGGACTGGGGACCAGTATCATAAGAAATGCTATGGGAATTCAAAGGGGATATGAATTTTATGGAGTCGACTTAACTTCGATTGCTGTCACCACTGGAATTATATTTGTGCTCGTTTTCATCTTCAACATCGTAGCTGCTCTTATTGGCGGTGCTAGCTTTAATCCTACTGGTACTGCTGCATTTTACGCTGTTGGTGCCGGTTCGGACACCCTTCTTTCGATGGCTTTACGTTTTCCTGCACAGGCAGCTGGTGCTGTAGGTGGTGCATTGGCGGTGATGGAAGTGATACCGACACATTACAAGCACATGATTGGCGGGCCTAAGTTAAAAGTGGACTTGCATACTGGAGCTATTGCTGAAGGAGTGCTGACATTCTTGATTACTTTCGCTGTCCTTTTAATTATTCTCAAGGGTCCCCGTAACTCAGTCATTCAGGCTTTCTTGCTGGCAGTGGCAACGATTGTATTTGTGATGGCTGGAGCTGCTTATACCGGACCTTCAATGAACCCTGCCAATGCTTATGGTTGGGCATATCAAAACAACTGGCACAATACATGGGAGCATTTCTACGTTTATTGGCTTTGCCCCTTTACCGGAGCTATATTAGCTGCTTGGCTCTTCCGCGTCATCGTTCCCTTTGGAGTTAAAAAACAGAGGAAGCCAAAGGCAAAAAGAGCCTAA 765 0.4588 MATMTRAITAAIADAVLTFMWVFCASMIGLGTSIIRNAMGIQRGYEFYGVDLTSIAVTTGIIFVLVFIFNIVAALIGGASFNPTGTAAFYAVGAGSDTLLSMALRFPAQAAGAVGGALAVMEVIPTHYKHMIGGPKLKVDLHTGAIAEGVLTFLITFAVLLIILKGPRNSVIQAFLLAVATIVFVMAGAAYTGPSMNPANAYGWAYQNNWHNTWEHFYVYWLCPFTGAILAAWLFRVIVPFGVKKQRKPKAKRA* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01539 254 PRINTS Major intrinsic protein family signature 62 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01539 254 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01539 254 PRINTS Major intrinsic protein family signature 218 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01539 254 PRINTS Major intrinsic protein family signature 9 28 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01539 254 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01539 254 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01539 254 SUPERFAMILY Aquaporin-like 4 245 IPR023271 -
Pte6g01539 254 PANTHER AQUAPORIN SIP1-1 7 248 IPR044222 GO:0015250
Pte6g01539 254 FunFam Aquaporin SIP1-1 4 252 - -
Pte6g01539 254 Gene3D Glycerol uptake facilitator protein. 3 247 IPR023271 -
Pte6g01539 254 Pfam Major intrinsic protein 6 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01539 Pte-Chr6 32970441 32974743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01539 4 238 Major Intrinsic Protein MIP AT3G04090 54.894 9.34e-76 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01539 K09875 - qsa:O6P43_009795 341.658