Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01535 ATGCTTATTGGTTCGGTAGTAACTCACAACTCTGCTTCTCAATCTATCGGTCGCTTTCTCTATAAGAAAGGAATGAAAAATTTGCAACGGGTTCAACTCCCCTGGCAGAGTTTGAATGTGGTTCTTTCAGTAATACTTCTTGATTTGCTATGTTGCTCATTCCATCTTCCTTTGCTTAGTTTGGGTTGTTGTCAAGCAGTGCCAATGTCTGACGGTCAAGAGTCTGATAAGAACATTGAGATATGGAAGATCAAGAAATTGATCAAAGCATTAGAATCTGCCAGAGGCAATGGAACCAGTATGATTTCCCTTATAATGCCTCCACGTGATCAGATATCACGTGTCACAAAGATGCTTGGTGATGAGTTCGGTACTGCTTCAAACATTAAAAGCAGAGTCAACAGGCAATCGGTGTTGGGAGCCATTACTTCTGCTCAACAGAGATTGAAGCTTTACAGCAAAGTTCCTCCCAATGGGTTGGTACTTTATACTGGAACCGTTGTCACTGAAGATGGCAAAGAGAAGAAAGTGACAATTGACTTTGAGCCTTTTAGGCCTATAAATGCATCACTATACCTCTGTGATAACAAGTTTCATACTGAAGCTCTAAATGAGCTTCTTGAATCTGATGACAAGTTTGGTTTTATTGTCATGGACGGCAATGGAACCCTCTTTGGAACATTAAGTGGAAACACGCGCGAGGTGCTTCATAAGTTCACAGTGGATCTTCCCAAGAAGCATGGAAGAGGAGGGCAGTCTGCTCTGCGTTTTGCTCGTCTCCGTATGGAAAAACGTCATAACTATGTTAGGAAGACTGCAGAGCTTGCTACACAATTTTTCATCAATCCTGCTACCAGTCAGCCTAATGTGTCAGGCCTGATTTTAGCTGGTTCAGCTGACTTCAAGACTGAACTGAGCCAATCAGATATGTTTGATCCTCGATTGCAAGCAAAGATATTAAATGTGGTTGACGTTTCTTATGGAGGAGAAAATGGTTTTAATCAAGCTATTGAGTTATCTGCAGAGATTTTATCCAATGTGAAATTTATACAGGAAAAGAAACTGATAGGGAAGTACTTTGAGGAGATCAGCCAGGACACAGGTAAATATGTTTTTGGCGTGGATGATACATTGAAGGCTCTAGAGATGGGTGCTGTGGAGACCCTTATCGTGTGGGAGAGCTTGGACATCAATAGGTACGAATTGAAAAATAGTTCTACTGGAGAGGTTATCGTAAAGCACCTGAACAAGGATCAAGAGACTGACCAAAGCAACTTCCGGGATGCAGCCACTTCAGCCGAGTTAGAAGTTCAGGAGAAATTGCCCTTGCTTGAATGGTTTGCGAATGAGTACAAGCGGTTTGGTTGTTCGCTGGAGTTTGTAACCAACAAATCTCAGGAAGGATCACAATTTTGCAGAGGGTTTGGAGGAATTGGAGGAATCCTTCGATACCAGCTTGACATTAGATCATTTGATGAATTTTCAGATGATGGAGGACTGTATGAGGATTCAGATTAA 1518 0.4183 MLIGSVVTHNSASQSIGRFLYKKGMKNLQRVQLPWQSLNVVLSVILLDLLCCSFHLPLLSLGCCQAVPMSDGQESDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYSKVPPNGLVLYTGTVVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWESLDINRYELKNSSTGEVIVKHLNKDQETDQSNFRDAATSAELEVQEKLPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDEFSDDGGLYEDSD* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01535 505 Pfam eRF1 domain 2 212 345 IPR005141 -
Pte6g01535 505 NCBIfam peptide chain release factor aRF-1 80 485 IPR004403 GO:0003747|GO:0006415
Pte6g01535 505 Gene3D eRF1 domain 2 204 345 IPR042226 -
Pte6g01535 505 SUPERFAMILY Translational machinery components 210 344 - -
Pte6g01535 505 Gene3D - 347 505 IPR029064 -
Pte6g01535 505 SMART eRF1_1_2 72 208 IPR005140 -
Pte6g01535 505 Pfam eRF1 domain 3 349 486 IPR005142 -
Pte6g01535 505 Pfam eRF1 domain 1 86 206 IPR005140 -
Pte6g01535 505 Gene3D eRF1 domain 1 68 203 IPR024049 -
Pte6g01535 505 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 72 497 IPR004403 GO:0003747|GO:0006415
Pte6g01535 505 SUPERFAMILY L30e-like 346 488 IPR029064 -
Pte6g01535 505 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 74 208 IPR024049 -
Pte6g01535 505 FunFam Eukaryotic peptide chain release factor subunit 1 204 345 - -
Pte6g01535 505 FunFam Eukaryotic peptide chain release factor subunit 1 70 203 - -
Pte6g01535 505 FunFam Peptide chain release factor subunit 1 347 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01535 Pte-Chr6 32932507 32935327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01535 69 506 Eukaryotic Initiation Factors Gene Family AT3G26618 91.096 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01535 K03265 - nnu:104602377 836.254