Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte6g01520 | ATGGTTCTTCAGAATGACATTGATTTGCTAAACCCCCCAGCTGAGCTGGAGAAGAAGAAACACAAACTCAAACGTCTTGTTCAGTCACCAAACTCCTTTTTCATGGTATTCAACAGGACTAATATCGTTCAACTTGGAGTTTCGAATACTGTATTTGGCTACAACGGGTTACTCTCAATTATAGGCTAG | 189 | 0.4021 | MVLQNDIDLLNPPAELEKKKHKLKRLVQSPNSFFMVFNRTNIVQLGVSNTVFGYNGLLSIIG* | 63 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte6g01520 | 62 | Gene3D | - | 5 | 53 | IPR023407 | - | |
| Pte6g01520 | 62 | PANTHER | 40S RIBOSOMAL PROTEIN S27 | 1 | 35 | IPR000592 | GO:0003735|GO:0005840|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte6g01520 | Pte-Chr6 | 32836224 | 32838779 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte6g01520 | 1 | 62 | Cytoplasmic Ribosomal Protein Gene Family | AT3G61110 | 62.500 | 7.77e-21 | 75.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte6g01520 | K02978 | - | twl:119990722 | 61.6178 |