Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01519 ATGTCAAGGACTCTTGCAGCAGTATTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTGGGGGTAATTGTTATATGTATTTGCCTAGGTCGCAAAAGGAGCGTGTCAAGGACTTCTGAGACAGGATCTTCTGATCCTTCTGTGCAATTAGGAGCACATGCTGGGATTGAGTTCCAGATACGAGATACTAGACGATTTGAGATGGAAGAACTGTTGGTGGCCACAAAAAATTTCAGCGAAAAAAATTTGATTGGACAAGGGAAATTTGGAGAGGTCTATAAGGGGTTGCTTCAAGATGGGATGCTTGTAGCAATAAAAAAGCGAAGTGGGTTTCCTAGTCAGGAATTCATAGATGAGGTACGGTATCTTTCATCCATTCAACATCGGAATCTGGTAACACTTCTGGGCTACTGCCAGGAAAACAATCTGCAGTTTCTCGTTTATGAGTATGTACCTAATGGAAGTGTTTCCGGCCACTTATATGGCACAGGTCAACAGTCACCTGTACCTGAGAAGCTAGAATTCAAGCATAGACTTCTCATAGCTCAAGGTGCTGCTAAAGGTTTGGCTCATCTTCATTCTCAGAGTCCCCGATTGGTACACAAGGATTTCAAGACTGCCAACGTTCTGGTGGATGAAAATTTTATTGCCAAGGTTGCAGATGCTGGACTTCGTAATTTCCTTGGAAAAGTTGATGTTGCAGGACCATCTTCTCAAGTGACAGCAGACGATATATTCCTTGCTCCTGAGGTGAAAGAGTTCAAGCAATTTTCAGAAAAAAGTGATGTTTACAGCTTTGGGGTATTTCTATTGGAATTAGTATGTGGAAGGGAAGCAACGGAATCGGCGTCTCCTGATTCTAATCAAAACCTGGTTGAATGGGTAACAAATCCAGAACGTCAAACTGTTCCCAGCATCATCGATCAGAGAATGGGAAGTAGCTTCACAGCTGAAGGCATAGAAGATTTCTTCCAGCTTATTGTTCAATGTCTTGACACATCGAGTGAGAGACGACCAGCCATGAGCTATGTGGTGATGGAACTTGATCGAGTACTTGAGAAAGAGATAACCGTGACAACAATAATGGGAGAAGGAACACCAACTGTGATACTTGGGAGTCAGCTTTTTAGAGCAACAAAATAA 1140 0.4316 MSRTLAAVLGGAAGAVALVGVIVICICLGRKRSVSRTSETGSSDPSVQLGAHAGIEFQIRDTRRFEMEELLVATKNFSEKNLIGQGKFGEVYKGLLQDGMLVAIKKRSGFPSQEFIDEVRYLSSIQHRNLVTLLGYCQENNLQFLVYEYVPNGSVSGHLYGTGQQSPVPEKLEFKHRLLIAQGAAKGLAHLHSQSPRLVHKDFKTANVLVDENFIAKVADAGLRNFLGKVDVAGPSSQVTADDIFLAPEVKEFKQFSEKSDVYSFGVFLLELVCGREATESASPDSNQNLVEWVTNPERQTVPSIIDQRMGSSFTAEGIEDFFQLIVQCLDTSSERRPAMSYVVMELDRVLEKEITVTTIMGEGTPTVILGSQLFRATK* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01519 379 FunFam Protein kinase superfamily protein 150 364 - -
Pte6g01519 379 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 12 356 IPR047117 -
Pte6g01519 379 FunFam Protein kinase superfamily protein 41 149 - -
Pte6g01519 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Pte6g01519 379 ProSiteProfiles Protein kinase domain profile. 77 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01519 379 Gene3D Transferase(Phosphotransferase) domain 1 150 363 - -
Pte6g01519 379 SUPERFAMILY Protein kinase-like (PK-like) 62 354 IPR011009 -
Pte6g01519 379 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Pte6g01519 379 Gene3D Phosphorylase Kinase; domain 1 44 149 - -
Pte6g01519 379 Pfam Protein tyrosine and serine/threonine kinase 80 347 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01519 Pte-Chr6 32804478 32807148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01519 18 352 Receptor kinase-like Gene Family AT1G30570 36.415 7.67e-67 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Pte6g01519 PK_Tyr_Ser-Thr 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01519 - - mnt:21390960 557.755