Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01497 ATGGAGAGAACAAAACGTTTGATCATCAATGGAGGAATCAAGCTGCCTGTAGGGTATCGTTTTCGTCCTACAGATGAAGAGCTTGTCATTTATTATTTGAAGAGGAAGGTGCATGCTCTCCCTTTACCAGCTTCTATCATTCCTCAGTTTGATGTTTTTCAAACTGAACCTTATGGTTTGCCAGGTCATGTAAAAGAAAAGAGGTACTTCTTCAGCATTAGAAAAGACAGCACTTTCTGCAAAGCTGGAAAGAGAGTTGCTGGATCTGGTTATTGGAAATCTACTGGCCAAGAGAAGCCAATCACAGTATCTGGGAGTAACAGGATAGTGGGAATGAGGAAAAGACTGATTTTTTATGAAGCAAAAGATTCTCACAATACCAAAACCAGATGGGTCATGCATGAGTTACGGCTTCTGGGTTCTGGAACAATTCCCAGATCATATCAGGTATCCGAGGTTGACAAGGAAGATTGGGCTGTATATCGTGTATTTCTGAAGAAGTCAAAGCCACAGGAAAGAAGCAGCACAGTACAGCACTCTAAAGAGAGGATTGTTGAGAATCCTGAGGAAAGCAAACCCAGTTTTATAGATTTTAAGGAGGAAACCTGCAATGTTGATGGAGGTCCTCCCCAACCTTCTTCTCCTAGTTGTTGCAGTGAAGTCACAATTAACGAATTAGAAGAGGAAGGAAATAGTACTGCATTACCATGA 711 0.4135 MERTKRLIINGGIKLPVGYRFRPTDEELVIYYLKRKVHALPLPASIIPQFDVFQTEPYGLPGHVKEKRYFFSIRKDSTFCKAGKRVAGSGYWKSTGQEKPITVSGSNRIVGMRKRLIFYEAKDSHNTKTRWVMHELRLLGSGTIPRSYQVSEVDKEDWAVYRVFLKKSKPQERSSTVQHSKERIVENPEESKPSFIDFKEETCNVDGGPPQPSSPSCCSEVTINELEEEGNSTALP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01497 236 MobiDBLite consensus disorder prediction 171 199 - -
Pte6g01497 236 PANTHER NAC TRANSCRIPTION FACTOR 56 15 186 - -
Pte6g01497 236 SUPERFAMILY NAC domain 11 166 IPR036093 GO:0003677|GO:0006355
Pte6g01497 236 ProSiteProfiles NAC domain profile. 15 166 IPR003441 GO:0003677|GO:0006355
Pte6g01497 236 Pfam No apical meristem (NAM) protein 16 138 IPR003441 GO:0003677|GO:0006355
Pte6g01497 236 Gene3D NAC domain 24 171 IPR036093 GO:0003677|GO:0006355
Pte6g01497 236 MobiDBLite consensus disorder prediction 171 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01497 Pte-Chr6 32659008 32660525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01497 6 209 NAC Transcription Factor Family AT5G13180 39.286 5.78e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte6g01497 NAM 1.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01497 - - qsu:111996957 242.276