Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01491 ATGGAGATGTTGAACGATATGAAGAGGAGTTTTGCTCGCAAACAAGACGTTGAACCCAATGATCCGAATGCTGCTGGTTCTGGAGATCAAACTCATGATGATGAGACAGAACAACAGAATCCAACCACACCAGCTGATGATAACACAGACCAAGAAAATCAAAAGGAGGAGGTGGCAGATCGCGAAGAGGAGCCTGCCAATGCTGATGAAAAGTCTCCTATTGTAGAAACCACTCCTTACAGCTTCGAATCTGTTTCCTCAGACGTCGATCTATTCGTGGAATCTCTGCAACAGCCAAATGATGCAGACCCTGACAGCAGCAACGGATTCGAGATCCCTCGATTTATTGAAAGATTCTTGGATCTTTTTGAGGAGAAGTTGTCCAAGTATGAAACCACAGGAGATGAAAAATTAAAGTGGAATCATGAACCAGAACATGACTCGTTGTTCCTTGACTCTCTTGATCGTGTTTCAAGGCTTGTGAAAGCCTTGAAGGAAACTTCTGATTCTGAAGAGATTATACCAGGACTGAAAGTTTCTCTTGTTAACCGCATAGGTTTGATTCAGCATCGAGCCATGTCGTGTTTGGAGGAGGAGTTCCGTATTCATCTCGAAGATGATCCTAATGACCCCAAAAAGAAGCAACCCAATGTTGAGCACGGTGCTTCTTCAGAAACGGATCCTGAAAAAACCGATTTGGATTACCCTGGTTATCCTGAAGACGTCATTCCTAATCTAACCAAATTAGCGAAGCATATGATCACAGGTGGCTACGAGGCTGAGTGTTGTCAGGTTTACATGGTTGCTAGAAGGCATGCATTTGAAGAGGCTTTGCATAAACAGCAAGGGTTTGAGAATCACAGCATAGACGAGCTTCATAAAATGCACTGGGAACCATTAGAACGTGAGATCGCGACGTGGATCAACACAGCCAAGGCATGCACCTCCATTTATCTTCCGGGAGAACGGAAACTCATTGACTCGATCTTCCCCGAGAACTCGATGATTTCAACTGGACTCTTGGGCAACCTTGTATCTGGGGTTCTCATACGTTTGCTCAATTTCACCGAAGGTGTTACCATGACCAAACGGTCTGCGGAGAAACTGTTCAAGTTTCTTGACATCTATGAGACCCTTCGAGACATGGTTCCTATCTTGGGTGAGCTGTTCCCTGAGAAATGTTTGGATGAAATCAAGGCAGAGGTCACATTAGCTAGGTGCCACATCGGCGAGACGGCGGTGCTCATATTCTGTGGTTTGGAGAACTCCATAAAATATGATGCCGGAAAAACTCCGGTTCCTGGTGGCGCAGTTCATCCTTTGAATCGTTACACCATGAACTACCTCAAGTATGCTTGTGAATATAAGGACACATTGGAGCAGATTTTCAAGGAGCACTCTAAAATCGAACGTGCTGATTCTACAAGTAAGCCTCGTGGTGAAGGAGATCAACGACAGAATTACAATGCAAGTAATAGCAACAACAATGGTGATGATAAAGAATCTTCTCCATTCTCGATGGAATTGATGAGGGTGATGGATTTACTAGACGCCAATCTTGAAGCCAAAGCGAAGCTGTACAAAGACGTATCGCTGAGCTGCATTTTCATGATGAACAATGGAAGGTATATCCTGCAGAAGATCAAAGGGTCTGCAGAGCTTCATGCACTGATGGGGAATATATGGTGCAGGAAGAGGTCATCCGATCTAAGGCAGTACCATAAGAACTATCAAAGGGAAACTTGGAGCAAACTCTTGAGTTGGTTGAACCACGAGGGGTTGACTTCTCATGGTAAGGTGATGAAGCCAGTGTTGAAGGAAAGGTTCAAGGGGTTCAACGCAATGTTTGAAGACATACACAAGACACAAAGCTCGTGGGTGGTGAGTGATGAGCAGCTTCAATCAGAGCTTCGTGTTTCAATATCAGCAGTTGTAATTCCTGCATACAGATCATTCTTGGGGAGGTTCGCACAGGTTTTGGACCCAGGAAGACAAACAGAGAAGTATATAAAGTTTCAGCCCGATGATATAGAGAATTACATTGATGAGCTATTCGATGGCCCAACATCCATGGCCAGGAGGAGACAGTAA 2091 0.4452 MEMLNDMKRSFARKQDVEPNDPNAAGSGDQTHDDETEQQNPTTPADDNTDQENQKEEVADREEEPANADEKSPIVETTPYSFESVSSDVDLFVESLQQPNDADPDSSNGFEIPRFIERFLDLFEEKLSKYETTGDEKLKWNHEPEHDSLFLDSLDRVSRLVKALKETSDSEEIIPGLKVSLVNRIGLIQHRAMSCLEEEFRIHLEDDPNDPKKKQPNVEHGASSETDPEKTDLDYPGYPEDVIPNLTKLAKHMITGGYEAECCQVYMVARRHAFEEALHKQQGFENHSIDELHKMHWEPLEREIATWINTAKACTSIYLPGERKLIDSIFPENSMISTGLLGNLVSGVLIRLLNFTEGVTMTKRSAEKLFKFLDIYETLRDMVPILGELFPEKCLDEIKAEVTLARCHIGETAVLIFCGLENSIKYDAGKTPVPGGAVHPLNRYTMNYLKYACEYKDTLEQIFKEHSKIERADSTSKPRGEGDQRQNYNASNSNNNGDDKESSPFSMELMRVMDLLDANLEAKAKLYKDVSLSCIFMMNNGRYILQKIKGSAELHALMGNIWCRKRSSDLRQYHKNYQRETWSKLLSWLNHEGLTSHGKVMKPVLKERFKGFNAMFEDIHKTQSSWVVSDEQLQSELRVSISAVVIPAYRSFLGRFAQVLDPGRQTEKYIKFQPDDIENYIDELFDGPTSMARRRQ* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01491 696 Pfam Exo70 exocyst complex subunit 306 683 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pte6g01491 696 MobiDBLite consensus disorder prediction 49 70 - -
Pte6g01491 696 MobiDBLite consensus disorder prediction 1 16 - -
Pte6g01491 696 MobiDBLite consensus disorder prediction 1 80 - -
Pte6g01491 696 Gene3D Exocyst complex component Exo70 127 695 - -
Pte6g01491 696 MobiDBLite consensus disorder prediction 205 236 - -
Pte6g01491 696 PANTHER EXOCYST COMPLEX PROTEIN EXO70 120 687 IPR004140 GO:0000145|GO:0006887
Pte6g01491 696 MobiDBLite consensus disorder prediction 469 503 - -
Pte6g01491 696 SUPERFAMILY Cullin repeat-like 130 686 IPR016159 -
Pte6g01491 696 MobiDBLite consensus disorder prediction 205 237 - -
Pte6g01491 696 MobiDBLite consensus disorder prediction 481 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01491 Pte-Chr6 32613550 32615640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01491 23 695 EXO70 exocyst subunit family AT5G13990 49.788 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01491 K07195 - qsa:O6P43_006071 767.689