Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01489 ATGATCCATTCACTTTGTGGAAGCATAGGGCCACTCAAGAGTGAAACTCCACATGTCAAACCACAACTAACTTCTCCAAATGAGTCATCAGCCTCTGAGTCCAAAAAGAGTGCCAGTGCTTCTTGTGAAATGGAGCAAAATCCTTTAACTCCACCAAGTCTAAGCCTCCATGGACGCAATTATGATCATCTGGAAGTAGAGGTGGAAGTCCAATCACCTGATAACTCATTGTGGGAGTCATTCTTCTCTGATCAGTTAGAGACTGATTTTATGATCTGTTCACCAGTCAGAAATGCGTCTTCCCCTCAGAATTCTCTGTATAACTACAGTTATGTTCAAGCAATGCAGGGTCAGAGTGTTTCGGGCTGCTCCCCTCGTCGCTTTTCTTCTCAGATTGGTTCGTATACTAGTAGCCTTAAAGGGAAAGGACTAAGCCCACTTCACAAGGTCTGTAACTCTCCAGATAATCAGTATTTAGAATCCATTGAAGGCCTTTCCTTGCCTGTAATTGAAGAGTTTCTGGAGGATTACCATAAAGATGGACTAGGAGGAGAGTTCTCCTCGTCGTCTGATCATATTGGATGTTCTCGTAGCTTTGACATCCCAACTAGAATCCCATCAATGGTGGACATGATGACGTCAAATTCATCAGAATTTTGTGGATCAACGAATGATACAGCTTCACCACATGGAGATGGTTCTCAACTTTCCCAAGAGGGTGATGTCGAGTATAAGGTGGGGTCTATCGGAAGTGGTAGACCACTCTTTGAAGCCTTGAAACAAGAACGCCAGCAGGAAAAGCAGCAGCGAAGACAACATCAACGGCAAACGCAACCCCAACAGCCTAAAAGCCTTAGCAGCTTGATGCATGTCCCTCTTTCTATTACAGAACAGGAGCACGATAGTGGGCTACAACTGGTGCATCTTCTTCTAGCTTGCGCTGAAGCAGTGGCCAAAGAGGACTACATGCTAGCAAGAAGGTATCTACACCATCTCAACCGAGTAGGCACACCTTTAGGAGACTCCATGCAACGTGTGGCCTCTTGTTTCACTGAAGCCTTAAGCGCAAGACTGGCCGCAACCCTCGCAACAAAACTTAGTATATGCAGTGCTCCAAAACCGCACTTGACTGCTTTCCCTCCAAACTCTCTAGAAATCCTCAAAATCTATCAGATTGTCTATCAGGCCTGCCCTTACGTCAAGTTTGCACATTTCACTGCCAATCAGGCAATGTTCGAAGCCTTTGAAGCAGAAGAACGGGTCCATGTTATCGACCTAGATATCCTCCAAGGCTACCAGTGGCCAGCTTTCATGCAGGCCTTGGCAGCTCGACCAGGTGGAGCTCCATTTCTCCGGATAACTGGTATTGGACCTTCAATAGACTCTGTGAAAGAGACAGGTAGGTGTTTAACTGAATTAGCTCATTCTCTGCACGTCCCTTTTGAATATCATCCAGTTGGTGAACAACTTGAAGACCTGAAGCCACACATGTTCCATCGGCGAGTTGGTGAGGCCTTAGCTGTTAACTCCGTCAACCGGCTCCACCGTGTTCCCTTCAACGGCCTGAGAAGCTTGCTAGCATTGATAAGAGATCAAGCCCCTAAGATATTTACCTTAGTGGAACAAGAAGCAAGCCACAACGGCCAATATTTCCTGGGCAGATTTCTTGAGGCACTGCACTATTACTCTGCTATATTTGATTCATTGGATGCAACTTTCCCTCCTGACTCTGCACAAAGGGCAAAGGTTGAGCAGTATATATTTGCACCAGAGATAAGGAACATAGTGGCATGTGAGGGGGCAGAGAGAATTGAAAGGCATGAGAGGTTAGAGAAGTGGAGGAAGATAATGGAAGGGAAAGGTTTCCAAGGCGTGTCGCTGAGTGCAAATGCAGTGACGCAGTCTAAGATATTGTTGGGTTTGTATTCATGTGATGGTTATAAACTGACAGAGGATAAGGGTTGCCTGTTATTGGGTTGGCAAGATAGAGCTCTAGTAGCTGCGTCCGCATGGAGGTGCTGA 2022 0.4609 MIHSLCGSIGPLKSETPHVKPQLTSPNESSASESKKSASASCEMEQNPLTPPSLSLHGRNYDHLEVEVEVQSPDNSLWESFFSDQLETDFMICSPVRNASSPQNSLYNYSYVQAMQGQSVSGCSPRRFSSQIGSYTSSLKGKGLSPLHKVCNSPDNQYLESIEGLSLPVIEEFLEDYHKDGLGGEFSSSSDHIGCSRSFDIPTRIPSMVDMMTSNSSEFCGSTNDTASPHGDGSQLSQEGDVEYKVGSIGSGRPLFEALKQERQQEKQQRRQHQRQTQPQQPKSLSSLMHVPLSITEQEHDSGLQLVHLLLACAEAVAKEDYMLARRYLHHLNRVGTPLGDSMQRVASCFTEALSARLAATLATKLSICSAPKPHLTAFPPNSLEILKIYQIVYQACPYVKFAHFTANQAMFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGIGPSIDSVKETGRCLTELAHSLHVPFEYHPVGEQLEDLKPHMFHRRVGEALAVNSVNRLHRVPFNGLRSLLALIRDQAPKIFTLVEQEASHNGQYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKVEQYIFAPEIRNIVACEGAERIERHERLEKWRKIMEGKGFQGVSLSANAVTQSKILLGLYSCDGYKLTEDKGCLLLGWQDRALVAASAWRC* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01489 673 Coils Coil 256 276 - -
Pte6g01489 673 ProSiteProfiles GRAS family profile. 297 672 IPR005202 -
Pte6g01489 673 MobiDBLite consensus disorder prediction 260 286 - -
Pte6g01489 673 MobiDBLite consensus disorder prediction 213 235 - -
Pte6g01489 673 MobiDBLite consensus disorder prediction 18 54 - -
Pte6g01489 673 Pfam GRAS domain family 306 672 IPR005202 -
Pte6g01489 673 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 264 668 IPR005202 -
Pte6g01489 673 MobiDBLite consensus disorder prediction 1 55 - -
Pte6g01489 673 MobiDBLite consensus disorder prediction 213 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01489 Pte-Chr6 32592058 32594235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01489 300 672 GRAS Transcription Factor Family AT3G03450 44.156 1.91e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte6g01489 GRAS 1.4e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01489 - - pvy:116129935 895.96