Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01484 ATGGGTGAGAGTAAGCAAACATCTGAAATAAAAGATTTGCAGGTTGTTGCTGCGGAAAAAGATGAGACCAACAAGAAGCAATTGGCGCCCAAGAGGACTTCAAACAAAGACAGGCACACAAAGGTTGAAGGCAGAGGAAGGAGGATAAGGATGCCGGCTCTGTGTGCAGCTAGGATTTTCCAGTTGACCAGAGAATTGGGTCACAAATCGGACGGTGAAACAATACAGTGGCTTTTGCAGCAGGCTGAGCCGTCGATAATTGCGGCGACAGGAACAGGAACTATACCAGCATCAGCTTTGGCAGCTGCAGGGGGCTCTGTTTCTCAACAGGGGACTTCTCTATCTGCGGGATTACATCAGAAAATTGACGAACTAGGCGGGTTCACTATCGGGTCAGCCGGTAGGACCAGTTGGACAATGGTTGGTGGGAATTTGGGGAGACCCCATGTGGCCACAGGTCTCTGGCCCCCGTCTGTAAGTGGGTTCGGCTTTCATTCGTCATCTGGGCCATCAACAACGAGTTTGGCAACCGAGAGTTCCACTTATCTGCAGAAGTTGGGATTTACTGGTTTTGACTTGCCAGGAGCTAACATGGGTCCAATGAGTTTCACATCGATCTTAGGTGGGGGCAATCAGCAGATGCCTGGTTTAGAACTTGGGTTGTCTCAGGATGGCAGTCATATTGGTGTTCTAAACCCACAAACCTTAAATCAGATTTATCAGCAGATGGGTCAGGCTAGAATGCATCAGGAATATCAAATTCAGCATGAGCATCAGCCTCCTCCTTCTGCTAAGGACGATTCTCAAGGCTCTGGACATTAG 822 0.4891 MGESKQTSEIKDLQVVAAEKDETNKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSQQGTSLSAGLHQKIDELGGFTIGSAGRTSWTMVGGNLGRPHVATGLWPPSVSGFGFHSSSGPSTTSLATESSTYLQKLGFTGFDLPGANMGPMSFTSILGGGNQQMPGLELGLSQDGSHIGVLNPQTLNQIYQQMGQARMHQEYQIQHEHQPPPSAKDDSQGSGH* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01484 273 MobiDBLite consensus disorder prediction 247 273 - -
Pte6g01484 273 MobiDBLite consensus disorder prediction 1 45 - -
Pte6g01484 273 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 111 IPR005333 GO:0003700
Pte6g01484 273 Pfam TCP family transcription factor 33 119 IPR017887 -
Pte6g01484 273 ProSiteProfiles TCP domain profile. 35 89 IPR017887 -
Pte6g01484 273 MobiDBLite consensus disorder prediction 14 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01484 Pte-Chr6 32534638 32537203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01484 5 274 TCP Transcription Factor Family AT3G27010 60.490 3.76e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte6g01484 TCP 7.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01484 - - cave:132180810 412.92