Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01468 ATGCCTGAGGATTCAACTTCTATAGACTATGTCATGGAGGCAGCGTCCGGTCCCCATTTCTCGGGGCTCCGACTTGACGGTCTCCTATCTGCTTCTTCATCTCCAGTTAATCCCCCCTTTGCTGCTTCTGATTCCTCTTCAATTTCAGTCGCAGACTCTTCTGCTCCTAAACAACCATTTTTCATAGGAGTTTCCGGCGGTACGGCTTCTGGAAAGACCACAGTTTGCGACATGATTATTCAACAGCTCCATGATCATCGCGTTGTTCTTGTGAATCAGGATTCCTTTTATCGTGGTTTGACGCCTGAAGAATTGCAACGAGTGAACGAGTACAACTTTGATCATCCTGATGCCTTTGATACAGAACAGCTTCTAGAGTGCATACAGAAGCTCAGGAGTGGGCAATCTGTTCAGGTCCCAATTTATGACTTTAAGAAGCACCAGCGCTCTTCTGATAGTTTCCGGCAGGTTAATGTTTCTGATGTGATCATCTTGGAGGGAATTCTTGTTTTCCATGACCATCGTGTTCGTAACCTGATGAACATGAAGATTTTTGTTGACACAGATGCTGACGTGAGGCTTGCAAGACGAATAAGACGTGACACTGTGGAAAGGGGTAGAGATATAAACTCTGTGCTTGAACAGTATGCAAAGTTTGTCAAGCCTGCTTTTGATGATTTTGTTCTCCCATCAAAGAAGTATGCTGATGTAATCATCCCCCGTGGAGGTGATAATCATGTCGCTGTTGATTTGATTGTGCAGCACATCCGTACAAAGCTTGGCCAACACGATCTATGCAAAATATATCCCAACCTGTATGTAATTCAGTCAACGTTTCAGATAAGAGGCATGCATACACTGATCCGCGATCGTGACATATCAAAGCATGATTTTGTGTTTTATTCAGACAGACTCATTCGTCTGGATCGGTATATACTGGTGTTGACTTCTGCAAGAAATTGTGTGGTGTTTCAATTGTTAGAAGGTAGCTTTAATATTAACTTTGATATTGTCTTGGTGATACACCTTCATCTATCACTTTTCTTGAGTAGCTAA 1056 0.428 MPEDSTSIDYVMEAASGPHFSGLRLDGLLSASSSPVNPPFAASDSSSISVADSSAPKQPFFIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEELQRVNEYNFDHPDAFDTEQLLECIQKLRSGQSVQVPIYDFKKHQRSSDSFRQVNVSDVIILEGILVFHDHRVRNLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAVDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDRDISKHDFVFYSDRLIRLDRYILVLTSARNCVVFQLLEGSFNINFDIVLVIHLHLSLFLSS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01468 351 SUPERFAMILY PRTase-like 262 324 IPR029057 -
Pte6g01468 351 Gene3D - 55 262 IPR027417 -
Pte6g01468 351 PRINTS Uridine kinase signature 205 216 - -
Pte6g01468 351 PRINTS Uridine kinase signature 59 76 - -
Pte6g01468 351 PRINTS Uridine kinase signature 191 201 - -
Pte6g01468 351 PRINTS Uridine kinase signature 134 149 - -
Pte6g01468 351 PRINTS Uridine kinase signature 89 100 - -
Pte6g01468 351 PRINTS Uridine kinase signature 227 240 - -
Pte6g01468 351 CDD UMPK 61 259 IPR000764 -
Pte6g01468 351 NCBIfam uridine kinase 59 259 IPR000764 -
Pte6g01468 351 FunFam Uridine kinase 56 262 - -
Pte6g01468 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 252 IPR027417 -
Pte6g01468 351 PANTHER URIDINE KINASE 50 265 - -
Pte6g01468 351 Pfam Phosphoribulokinase / Uridine kinase family 61 247 IPR006083 GO:0005524|GO:0016301
Pte6g01468 351 Gene3D - 263 322 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01468 Pte-Chr6 32457534 32461811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01468 1 308 PRT Gene Family AT5G40870 84.244 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01468 K00876 - oeu:111367042 556.599