Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01449 ATGGTACCATATGTATTTAAGATTGAAGCATGTAATGCTTCTTACAATGGAATACATTTTTTCAGGTGGTCTAAAATTGCTGCACATTTTCCTGGTAGAACAGACAATGAGATTAAGAACCACTGGAATACTAGAATCAAGAAAAAGCTAAAGCTTCTTGGCATAGACCCTGTGACACATGAGCCAATTGAGAAGAAGGACGATGCTGACAGTAAAAGCAAAGCCATTTCGCTGCAGCCTGGTACTCAATCGGAAGGGCATGAGGAAATTATAGAAATATTACAGGAAAGTATTGAGATTAACTCGATTGGTAGAAACTCCAAGGAAGAAAAGTCTGTAACAGAAGAGAAACAAGAAACAAGAAATTTGGATGACAGTGTTCGTGATGTCATTTTAGACAAATACGAAATGTTATGTGGAGACTTGGATACTGGTGTATGGATAAACCAGGACATATACACCAGTACAGACAGCACTAGTTCCTATAGTTCTTCTGTTTCTGTTTCTCTTGATGATTCCTCCAACCACATTAATGTCGATAAATCTCAAGTTTTAGTAGACACATTGCAGGGATGGATTGATAACATTGATTCTATATTTTCATGGGATAGCTTCAATAATCTGGACCAAGATCTTTTCTTCTTGCAAACCAGACAGTAA 660 0.3712 MVPYVFKIEACNASYNGIHFFRWSKIAAHFPGRTDNEIKNHWNTRIKKKLKLLGIDPVTHEPIEKKDDADSKSKAISLQPGTQSEGHEEIIEILQESIEINSIGRNSKEEKSVTEEKQETRNLDDSVRDVILDKYEMLCGDLDTGVWINQDIYTSTDSTSSYSSSVSVSLDDSSNHINVDKSQVLVDTLQGWIDNIDSIFSWDSFNNLDQDLFFLQTRQ* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01449 219 Gene3D - 8 79 - -
Pte6g01449 219 PANTHER F14D16.11-RELATED 22 149 - -
Pte6g01449 219 SUPERFAMILY Homeodomain-like 19 52 IPR009057 -
Pte6g01449 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 50 IPR017930 -
Pte6g01449 219 MobiDBLite consensus disorder prediction 61 84 - -
Pte6g01449 219 CDD SANT 22 44 IPR001005 -
Pte6g01449 219 ProSiteProfiles Myb-like domain profile. 22 46 IPR001005 -
Pte6g01449 219 Pfam Myb-like DNA-binding domain 22 44 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01449 Pte-Chr6 32223377 32224036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01449 15 215 MYB Transcription Factor Family AT5G14340 32.843 5.52e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte6g01449 Myb_DNA-binding 7.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01449 K09422 - gmx:100783231 169.859