Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01430 ATGGCTGGAAAACCTATTAGAGGTATGATAATTCAGATGGCTCTTCTGGCAATTCTTATGAATGTTGCTGTTCAATCATCACGGCTCCTCTTAGGGACTAACAAACCCATACCATGTGATGCATCTCAGGTGGAGACTTGGTTCCAGGCCCAAATTCAAGATACCAAGAGGCCTGATCTTGACCCAGAACTAGTAAAGGCAGAGGCTACTCCTCCTAAGATCATCAAGGTCAATAAGGATGGAAGTGGGGATTTTAAGACTATGACAGGAGCAGTCAACAGCATTCCAGTTGGGAATGTCAATCGAGTTATAGTCTTCATTGGAGGAGTGTATACTGAGAAAATCAAGATTGAAAGGGAAAAACCTTTTGTCACATTTTATGGAGCGCCAAATGACATACCAACTTTGATGTTTGGCGGTACCGCAGCACAATAA 435 0.4276 MAGKPIRGMIIQMALLAILMNVAVQSSRLLLGTNKPIPCDASQVETWFQAQIQDTKRPDLDPELVKAEATPPKIIKVNKDGSGDFKTMTGAVNSIPVGNVNRVIVFIGGVYTEKIKIEREKPFVTFYGAPNDIPTLMFGGTAAQ* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01430 144 Pfam Pectinesterase 76 130 IPR000070 GO:0030599|GO:0042545
Pte6g01430 144 Gene3D - 23 142 IPR012334 -
Pte6g01430 144 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 143 - -
Pte6g01430 144 SUPERFAMILY Pectin lyase-like 70 138 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01430 Pte-Chr6 32141049 32141483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01430 11 144 Carbohydrate Esterase AT5G07420 41.606 1.53e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01430 K01051 - csin:114319910 143.28