Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01418 ATGGCTGGCTTGGAGGAATTAAGGAAAAAGCTTGCTCCTTTATTTGATGCTGAGAAGGGATTCTCATCTGGGTCTTCGTTGGACCCTTCTGATTCATATACATTATCAGATGGCGGGACAGTCAACTTGTTGAGCAGATCATATGGGGTGTACAACATCAATGAGCTTGGACTGCAAAAGTTCACTTCAGGGATATTGGATGAAGTGGATTCTAGTGAAAGGACTTACAAATGTGCTTCCTATGAGATGAGAACATTTGGAGCCATAGGTAGTGGAGCTAGTAGTGTGGTTCAGAGGGCTATACATATACCAAGGCACAGAATTTTAGCACTGAAGAAGATAAATATTTTCGAAAAGGAGAAAAGGCAGCAACTTCTTACTGAGATCCGAACCTTGTGCGAAGCACCTTGTTCTCAGGGTCTTGTAGAATTCCATGGGGCATTTTATATTCCAGATTCAGGACAAATAAGCATAGCTTTGGAATACATGGATGGAGGATCACTTTCCGATATACTGCGAATTCACAAAAGAATTCCTGAACCGATTCTTTCATCTATGTTTCAGAAGCTTCTGCATGGATTAAACTATTTGCATGGAGTCAGACATCTCGTGCACAGAGACATAAAGCCAGCCAATTTGCTTGTGAATCTCAAGGGGGAGCCTAAAATAACAGATTTTGGAATAAGTGCAGGCCTAGAGAATTCAATGGCAATGTGTGCTACATTTGTTGGAACTGTCACCTACATGTCACCTGAGCGCATAAGGAACGAAAGCTATTCTTATCCAGCTGATATATGGAGCCTTGGGCTTGCTCTATTTGAGTGTGGAACAGGAGAATTTCCTTATACAGCTAATGAGGGACCTGTGAATCTAATGTTACAGATCTTGGATGATCCATCACCTTCGCCATCAGTGCACCACTTTTCTCCAGAGTTCTGTTCTTTCGTTGATGCATGCTTGCAGAAAGATGCAGATACAAGGCCAACAGCAGAGCAGCTGCTTTCACACCCTTTCATTAGCAAGTATGAGAAGGCGAATGTAGATTTAGCAGGATTCGTCCGAAGTGTTTTTGATCCAACACAAAGGATGAAGGATTTGGCAGATATGTTAACATTGCATTACTATTTACTGTTTGATGGACCTGATGAACACTGGCGACATGTAAAGACCTTATACAATGAAGGATCAACTTTCAGTTTCTCAGGCAAACAGTACGTTGGTCCAAATGACATTTTTACAAGACTCTCAGAAATTCGAAGTAAGTTAGCTGGTGATTGGCCTCCGGAAAAACTAGTTCACATTGTGGAAAAACTTCAATGCCGCGCTCAGGGTGAAGATGGAGTTGCGATCAGAGTATCTGGATCCTTCATTGTTGGGAATCATTTCCTTGTATGTGGTGATGGTATTCAAGTAGATGGCTTGCCTAATTTTAAAGATCTCGGCATTGACATTGCTACCAATCGCATGGGTACTTTCCGCGAACAATTTATTATGGAACCAGGCAATCTCATCGGATGCTATGTCATTTCTAAACAAGAATTGTACATTATGCAGTAA 1557 0.4155 MAGLEELRKKLAPLFDAEKGFSSGSSLDPSDSYTLSDGGTVNLLSRSYGVYNINELGLQKFTSGILDEVDSSERTYKCASYEMRTFGAIGSGASSVVQRAIHIPRHRILALKKINIFEKEKRQQLLTEIRTLCEAPCSQGLVEFHGAFYIPDSGQISIALEYMDGGSLSDILRIHKRIPEPILSSMFQKLLHGLNYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALFECGTGEFPYTANEGPVNLMLQILDDPSPSPSVHHFSPEFCSFVDACLQKDADTRPTAEQLLSHPFISKYEKANVDLAGFVRSVFDPTQRMKDLADMLTLHYYLLFDGPDEHWRHVKTLYNEGSTFSFSGKQYVGPNDIFTRLSEIRSKLAGDWPPEKLVHIVEKLQCRAQGEDGVAIRVSGSFIVGNHFLVCGDGIQVDGLPNFKDLGIDIATNRMGTFREQFIMEPGNLIGCYVISKQELYIMQ* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01418 518 FunFam mitogen-activated protein kinase kinase 3 56 164 - -
Pte6g01418 518 SMART serkin_6 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01418 518 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 516 IPR018222 -
Pte6g01418 518 SUPERFAMILY Protein kinase-like (PK-like) 87 354 IPR011009 -
Pte6g01418 518 Gene3D - 358 516 - -
Pte6g01418 518 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 25 397 - -
Pte6g01418 518 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Pte6g01418 518 SUPERFAMILY NTF2-like 364 461 IPR032710 -
Pte6g01418 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pte6g01418 518 CDD PKc_MAPKK_plant_like 87 344 - -
Pte6g01418 518 FunFam Mitogen-activated protein kinase kinase 3 363 517 - -
Pte6g01418 518 Pfam Protein kinase domain 86 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01418 518 Gene3D Phosphorylase Kinase; domain 1 76 158 - -
Pte6g01418 518 Gene3D Transferase(Phosphotransferase) domain 1 159 354 - -
Pte6g01418 518 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01418 518 FunFam mitogen-activated protein kinase kinase 3 165 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01418 Pte-Chr6 32048068 32054697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01418 35 516 MAP Kinase Kinase Gene Family AT5G40440 78.423 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pte6g01418 Pkinase 1.1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01418 K20607 - qsa:O6P43_008917 922.154