Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01409 ATGGACGGATGTACTGGTGAAATGGGCTTTGGTCATGCGAAAAGAGAAAAGCGAAGATGGATTTTTAGGAAGACAACAAATCAAGAGTCAACCACCCCACCAAAGGTTAAGCCTGATTTGGCTACGGGAGGCTCTGCAAGAACAGAAGATGCATCAGTTACAGTAACCACATCATCTGCTGACCAAAAACATGCTCTTGCAGTGGCAGCGGCCACTGCTGAAGCAGCAAGGGTCACTGCTCAAGCGGCAGCGGAGGTAGCCAGGATGGCGAGACCTCTTACTCGCGGTAAAGAGCAGTATGCTGCCATTGTGATTCAAACTGCTTTCAGAGGATATCTAGCAAGGAGAGCACTTTGA 357 0.4902 MDGCTGEMGFGHAKREKRRWIFRKTTNQESTTPPKVKPDLATGGSARTEDASVTVTTSSADQKHALAVAAATAEAARVTAQAAAEVARMARPLTRGKEQYAAIVIQTAFRGYLARRAL* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01409 118 PANTHER IQ-DOMAIN 5-RELATED 15 118 - -
Pte6g01409 118 Gene3D iswi atpase 93 118 - -
Pte6g01409 118 ProSiteProfiles IQ motif profile. 98 118 IPR000048 GO:0005515
Pte6g01409 118 MobiDBLite consensus disorder prediction 1 59 - -
Pte6g01409 118 Pfam IQ calmodulin-binding motif 101 117 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01409 Pte-Chr6 31985080 31986339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01409 18 118 IQD Protein Family AT4G00820 40.187 5.91e-13 62.0