Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01406 ATGAACAAGCTAGACAAACAATGGTTGTTGTTTTTGTTTATCATGGTTTGCATCTCTCTCCATGTCAACAGGGTTCTTGGAACTGACACGCTCTCCTCAAACAAATCTCTTTCTGGAGACCAAACCATTGTGTCGATTGGTAAGGTCTTTGAACTAGGATTCTTCAGTCCAGGTAACTCTAGAAACTACTATTTAGGCATATGGTACAAGCAGATTACTCCTCGGACAGTTGTTTGGGTTGCAAACAGGGAACAACCTGTTTCTGACAAGAATTCTGCACACCTAAAAATATCTGACGGTAATCTTGTCCTATTCAACGACTCAGACGTCCCTATTTGGTCCACAAATATGAGTTCTACAAGCAATAACCTCTTACAAGCTATCCTCTTAGATTCTGGGAATCTTATATTGACAAATGGTTCCGAGACTTCACAATTTTTGTGGCAAAGTTTTGATAATCCATCACATACATGGCTTCCTGGTGGAAAAATTCGTTTTGACAAGAGAAAAAACCAAAGTCAGCTTCTCACTTCATGGAAGAATTCCGAGAATCCTGCATCAGGTCTCTTCTCTCTAGAGCTTGACCCAGAAGGAAGCAAAGCATACTTCATGTTGTGGAATAAGTCTGTGAAGTATTGGTCAAGTGGACCTTGGGATCCGGAGGAACATATTTTTAGTTCTGTCCCTGAAATGAGGTTAAATTTTTTGTATAATTTCACGTTTATTGAAAACGATGATGAGAGTTACTTCACCTTTAGTATGTACAACAGTTCTATATTGTCTCGGTTTGTGATGGAAATCTCAGGGCAGATTAAGGTGTACTCATGGATTCCCAACTCTCAGCTATGGAACTTGTTTTGGTCACAGCCGAGACAACAATGTGAAGTGTATGAATACTGTGGAGCCTTCGGAAGTTGTGACAGATTGGAGACTCCATGTGCTTGTTTGCAAGGATTTAAGCCACAGTCTGACAGTGATTGGAAGTTGCAGGACTACTCGCGAGGGTGTGAGAGAAAAACTGCTTTGCAATGTGGGACGACGAGAGCTGCCAATGCCGACGAGGACAAGTTTCTATCTCAACCAAACGTGAAACTACCAGAGCATCAACAAAGAGTTGGGGATGTATCAAGTGTAGCTGCATGCGAAGCAAGTTGCTTGAACAACTGTTCCTGCACTGCTTATACATATGATTCAAGTGGGTGCTCGATTTGGATTGGATATATCTTGAGCTTGGAGAGGCTCCCGGTTGATGATTCTACCGGCAAAACTATATATATTAGACTTGCAGCTTCTGAATTTCCTAAGCCGAAAAATCACACTGGGATGATCGCTGGCATTCTTGTCGGTGTTTCAGTTCTGGTACTTGTAGTGGCAATCATTTTGTTTATCATACTGAGACAATGGAAGAGGACTGCTGGAACAGGAAAAACGGTAGAAGGTTCACTAGTAGCATTTGGGTACAGAGATTTGCAAAACGCAACCAAGAACTTCTCAGAGAAATTGGGTGGAGGAGGGTTTGGTTCTGTTTTCAAGGGCAAGTTATCAGGTGCAACTGTCATAGCAGTGAAAAAGCTAGAGAGCATCAGCCAAGGAGAGAAACAGTTCAGGACAGAAGTTTGCACAATTGGGACAATCCAGCATGTTAATCTCGTTCGTCTTCGTGGATTCTGCTCTGAAGGTAGCAGAAAGTTGCTGGTCTATGATTACATGCCAAATGGCTCTCTAAACTCTCATTTGTTTGTGGAAAACAACCACCAAATATTGGACTGGAAAACAAGATATCAAATTGCTTTAGGAACTGCTAGAGGATTGACATATCTCCATGAGAAGTGCAGGGATTGCATTATCCATTGTGACATAAAACCCGAAAACATTCTCTTGGATGCTGATTATGTTCCGAAGATAGCTGATTTTGGCCTAGCAAAACTGGTTGGAAGAGACTTCAGTCGTGTCCTGACAACCATGAGAGGCACAAGAGGTTACCTTGCTCCAGAGTGGATTTCTGGGATGGCTATTACAGCCAAAGCCGATGTTTACAGCTATGGAATGATGCTGTTTGAGCTTGTTTCTGGAAGGAGAAACTCTGAGCCCTCCGAAGATGGAAAAGTGAAATTCTTGCCATCTTCGGCTGCAAGTATAATCGCAGAAGGAGGTGACGTCCATACCCTGTTGGATTCTGGGTTGGAGGGGGATGCTAATACACAGGAGCTGACTAGAATTTGCAAAGTTGCTAGCTGGTGCGTCCAAGATGATGAATCTCACAGACCAACAATGGGCCAGGTGGTTCAAATACTTGAGGGAATAATGGAAGTGAACTCGCCACCCGTGCCAAGGTTTTTCCAACTTTTTGTTGATAACCAAGATCAAATAATGTTCTTTACTGATTCACCAACTGACCAGAGTTCACAGTCACGTAGCCAGACCATTTCTGCTTCTCCTCATGTGAAGAGCAACATATCATCTGCAAGTGTCAATTAA 2478 0.4257 MNKLDKQWLLFLFIMVCISLHVNRVLGTDTLSSNKSLSGDQTIVSIGKVFELGFFSPGNSRNYYLGIWYKQITPRTVVWVANREQPVSDKNSAHLKISDGNLVLFNDSDVPIWSTNMSSTSNNLLQAILLDSGNLILTNGSETSQFLWQSFDNPSHTWLPGGKIRFDKRKNQSQLLTSWKNSENPASGLFSLELDPEGSKAYFMLWNKSVKYWSSGPWDPEEHIFSSVPEMRLNFLYNFTFIENDDESYFTFSMYNSSILSRFVMEISGQIKVYSWIPNSQLWNLFWSQPRQQCEVYEYCGAFGSCDRLETPCACLQGFKPQSDSDWKLQDYSRGCERKTALQCGTTRAANADEDKFLSQPNVKLPEHQQRVGDVSSVAACEASCLNNCSCTAYTYDSSGCSIWIGYILSLERLPVDDSTGKTIYIRLAASEFPKPKNHTGMIAGILVGVSVLVLVVAIILFIILRQWKRTAGTGKTVEGSLVAFGYRDLQNATKNFSEKLGGGGFGSVFKGKLSGATVIAVKKLESISQGEKQFRTEVCTIGTIQHVNLVRLRGFCSEGSRKLLVYDYMPNGSLNSHLFVENNHQILDWKTRYQIALGTARGLTYLHEKCRDCIIHCDIKPENILLDADYVPKIADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGMAITAKADVYSYGMMLFELVSGRRNSEPSEDGKVKFLPSSAASIIAEGGDVHTLLDSGLEGDANTQELTRICKVASWCVQDDESHRPTMGQVVQILEGIMEVNSPPVPRFFQLFVDNQDQIMFFTDSPTDQSSQSRSQTISASPHVKSNISSASVN* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01406 825 SMART serkin_6 495 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01406 825 CDD B_lectin 34 154 IPR001480 -
Pte6g01406 825 Gene3D - 25 151 IPR036426 -
Pte6g01406 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 218 IPR036426 -
Pte6g01406 825 FunFam Receptor-like protein kinase 4 463 569 - -
Pte6g01406 825 ProSiteProfiles PAN/Apple domain profile. 344 429 IPR003609 -
Pte6g01406 825 SUPERFAMILY Protein kinase-like (PK-like) 481 802 IPR011009 -
Pte6g01406 825 Gene3D Phosphorylase Kinase; domain 1 463 569 - -
Pte6g01406 825 ProSiteProfiles Protein kinase domain profile. 495 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01406 825 Pfam D-mannose binding lectin 76 180 IPR001480 -
Pte6g01406 825 Pfam PAN-like domain 352 409 IPR003609 -
Pte6g01406 825 PIRSF SRK 2 816 IPR024171 GO:0004674
Pte6g01406 825 SMART ntp_6 352 428 IPR003609 -
Pte6g01406 825 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Pte6g01406 825 FunFam Serine/threonine-protein kinase 23 151 - -
Pte6g01406 825 CDD PAN_AP_plant 340 429 - -
Pte6g01406 825 PANTHER OS07G0415500 PROTEIN 12 777 - -
Pte6g01406 825 SMART blect_4 34 154 IPR001480 -
Pte6g01406 825 Gene3D Transferase(Phosphotransferase) domain 1 570 775 - -
Pte6g01406 825 FunFam Serine/threonine-protein kinase 570 773 - -
Pte6g01406 825 ProSitePatterns Protein kinases ATP-binding region signature. 501 524 IPR017441 GO:0005524
Pte6g01406 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Pte6g01406 825 Pfam Protein kinase domain 498 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01406 825 MobiDBLite consensus disorder prediction 794 825 - -
Pte6g01406 825 CDD STKc_IRAK 501 768 - -
Pte6g01406 825 ProSiteProfiles Bulb-type lectin domain profile. 28 150 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01406 Pte-Chr6 31964116 31966844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01406 414 772 Receptor kinase-like Gene Family AT1G56120 41.444 3.31e-75 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pte6g01406 Pkinase 5.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01406 - - qsa:O6P43_000641 1108.59