Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01397 ATGGCTCCTAAGCGCCCTTTGTCTAATCCGCCTCCTCGTTCTTCCTCTGAAGATGAAGAACAATCCGATACAGAAGACGAGCAGGAACCAGAACAAATACAAGCGCAACAAAATGGTGGACCGGAGGAACCAGAGGAGAAGTCTGATGAAGAAGAGGAAGGAGAGGAATACAATGATAACGATGAAGAACAGAAACCAGCTCCGAAAGTTCCGGCTTCAAAAGCCAGTCTTCCTGCGGTCGATGATTCCGGTTCGGAAACTGAAACTGAATCCGATTCCAGCAACTCCCGACCTTCCCAATCCGCTTCTGAAATTGCTGTTACGCTGATTACTACAAAGCCGACGAACGATTCGGCTAAACCGAGGAGGGACTCAGTCAAGCGCAATCTAAATATATCGCCGGCCACAACTCCCACTAGAAGCGTTGGGTCGAAGCGTGCGAACGAGAGTGATGTCGAGAAAAAAGACTCCAAGAAGAAGAAGGCGGCCAATGGTGTCGATGAAGAAGATGCCAAAAAGAACACTGGGTTTCAACGAGTTTGGAGCGAGGAGGACGAAATTGAAATACTGAAAGCCATGATTGACTATCGAATGAAGAAAGGGTCTGAACCTAATACTGACATGGGTGCCTTTTACGAATTCGTCAAGAAAAGAATTAATGTAAATGCGTCAAAGAGTCAAGTGATTGATAAAATCAGAAGATTGAAGAAAAAATATCAGAACTATGCAGATAAAAGTGTGGATGGCAAGGATCCAATTTTACCTAGGCCTCATGAGTATCTTACTTATGAGCTTTCTAAGAAAATATGGGGTCCACATAGGCTCGAACATGGTGAGAAGAATAAGAAAACGACAGGGCCAGGAGTGGCAGGACAGAGCAACAAAGCTAAGAATGATAGTACTCCTATAAGGAGGAAAGATGTTCATGCTAATGGGGTGGTTCGGTTTAAAGCTAATGGCGATGCCCATGTGCTGAGACATGAGAACTTGGACTCTGCGCTTTTGTCAGTATTGGCATCAGAGAACCTTTCCTCACACCCAGATGCTGCTTCAAGTTTCGTGAGAAAGGCCTTGCCTTTGATTGACACTGTCAAGGCTGAGGAGTTTGACCAGAACTGGAAGGAATTGCAAAAAGAACAATTCGAATTGTTTGTGAAACAGACTAGCTTTATACTTGATGGTGCGAAGCTAGTGCTGGAGGCAATGAAGTCCTCTGAGTCTCTGACAACTGACAAGGCTTGA 1242 0.4501 MAPKRPLSNPPPRSSSEDEEQSDTEDEQEPEQIQAQQNGGPEEPEEKSDEEEEGEEYNDNDEEQKPAPKVPASKASLPAVDDSGSETETESDSSNSRPSQSASEIAVTLITTKPTNDSAKPRRDSVKRNLNISPATTPTRSVGSKRANESDVEKKDSKKKKAANGVDEEDAKKNTGFQRVWSEEDEIEILKAMIDYRMKKGSEPNTDMGAFYEFVKKRINVNASKSQVIDKIRRLKKKYQNYADKSVDGKDPILPRPHEYLTYELSKKIWGPHRLEHGEKNKKTTGPGVAGQSNKAKNDSTPIRRKDVHANGVVRFKANGDAHVLRHENLDSALLSVLASENLSSHPDAASSFVRKALPLIDTVKAEEFDQNWKELQKEQFELFVKQTSFILDGAKLVLEAMKSSESLTTDKA* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01397 413 MobiDBLite consensus disorder prediction 146 178 - -
Pte6g01397 413 MobiDBLite consensus disorder prediction 1 178 - -
Pte6g01397 413 MobiDBLite consensus disorder prediction 44 60 - -
Pte6g01397 413 Pfam Protein of unknown function, DUF573 177 271 IPR007592 GO:0006355
Pte6g01397 413 PANTHER BNAANNG10740D PROTEIN-RELATED 12 401 IPR007592 GO:0006355
Pte6g01397 413 MobiDBLite consensus disorder prediction 80 116 - -
Pte6g01397 413 Coils Coil 225 245 - -
Pte6g01397 413 MobiDBLite consensus disorder prediction 129 145 - -
Pte6g01397 413 MobiDBLite consensus disorder prediction 274 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01397 Pte-Chr6 31853434 31856433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01397 72 403 GeBP Transcription Factor Family AT1G61730 32.059 8.33e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pte6g01397 DUF573 4e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01397 - - qsa:O6P43_000617 274.248