Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01396 ATGGAATTCAGAAGAGTTTGCTGTGCTCTTGTTTATGTTATTCTGCTTTGCGCATTGGCCACTTGGAGTTCATCAGAGGGCAAGAGGTGGTGGCCGGTAGACTTTTCTCAGAACCATGATGGTGATATCCAATTGCTTCCCACGATGGGGGAACAGGTACAGACTTGTTGCAGGGAAGCTTTGATAAACAAGAGGAACACAGAAGATTTCAAATCATGCATCTCACAGAGTAGTAAGTTGAGACCTGAGCAGATAACTGCAAACGTGAACATAGTGATCAATTCACTGCCTGTGCATTTGAAATGCTACTTGTTAGAATGCATGCAAAAGAGAAGTGTTAGGTTTCCTGGTTTAGAAGAGGAGTTGGATTCTACAGCACGGCTGATGAAGTGTACTGAGACGACTTTTAGCTGCCCAAATAGAAGATTTTTGGTTGGTAAACCACAAGCTCATGTTGCTATAAGCGCTCACCCTGTTCAAGCCCCCATTCCTGGTCAAGCTCGAGGTTCTTCCCTAGCTCCTGCTCTGTCTAGTTATGGCCCTCTACCTGCTAGCTCTACATCAGCTCTTTCTCAGCTCCATGACTTACTTCAACCATCTCCACCTCCTAAAAACTCTTATCATCCTAGTTATTCATCACAGCACACAGATAGCATGCAGAAGCAACAAATTATTGCTGCTGCCATAGCTTCAGGAGCAGCCATTTTGCTGATTCTGTTCATTTACTTCTGCTGTGTCAGGGGTAGAAGGAACAAAGTTGACCCAAAAGAAGGACATAAAGATGATCACCCCCTGCTTAACTTGACCACAACCAATTTTTCTGCTGGTTCTTCGCGGAAGCCAGTGAGTTTAGAAAACAAAGAGCTTATAATTAACAATGGAAAGCACCCTTATTTGGCTAGCGAGGTTTCCATGAAATCTGAAGTTCATGATAGTGCTGTGGCTGAGGGATTATCCCCAGTAGCTGTAGGATCAACTCTTCCTTTAAAAACATCCCCTAGAAGATCACTTCCACCACCCCCTACACCACCAGTTCCACCACCTCCACCTCCTGTACCTACTCGCCCCTCACAACCTCTTCCTGCTGGTCCTCGCCCCCCAGAGCCTCCAAAACTTGCTCAGCCACCCCCTCTGCCGAAAAAAGGTCCTGGTAAAGATCAACTTTCACCTCTTTGGCCGAATCGCAATGGAACATCTGGTTCGGGTTTGGGAGGAGAAACTAATGGCTATTCTGAAGGTCCCAAAGCCAAATTAAAACCATTCTTCTGGGATAAGGTTCTTGCGAACCCCAATCAATCAATGGTCTGGCATGAGATCAGAGCTGGGTCATTCCAGTTCGATGAGGAAATGATTGAGTCTCTATTTGGTTGCAACAATATAGATGGAAATAAAACTGGAAACAGTAGAGAGTCTCCAGAACCTTCAGTCCAGTACATTCGGATTATTGACCCTAAGAAAGCACAAAATTTGTCTATTCTTCTTAAAGCTCTGGATGTGACAACAGATGAAGTTGTTGACGCCCTCAGAGAAGGTAAAGAGCTCCCCGTTGGGCTGCTCCAAACATTGTTGAAGATGGCACCAACTATAGATGAGGAACTGAAGCTAAGATTGTTTACTGGAGACCTTATGCTTCTTAGTCCGGCTGAGAGATTTCTCAAAGTATTGGTTGATATCCCGTTTGCTTTTAAACGACTAGAATCCATACATTATATGGCAACATTTCTCGATGATTTTGCCAGTGTCAAGGAGTCCTTAACAACATTACAGGTTGCTTCAAACAAGCTCAGGGAAAGCAGATTATTCCTGAAGCTATTAGAAGCAGTTCTCAAAACTGGCAATCGCATGAATGATGGCACTTACCGAGGTGGTGCTCTAGCCTTTAGGCTTGACACCCTTCTGAAGCTATCTGACGTGAAAGGAACTGATGGGAAGACAACGTTGCTGCACTTTGTGGTTCAGGAGATCATAAGGTCTGAGGGCAGACGAGCTGTACGCATGGTGAAAGCAAGCCAAGACTTGGTGGAGCATTCTAGTGAGGAATTAGAAGACCAGTATCATGCCATTGGCCTTCAGGTGATTTCCGGATTAAGCAATGAATTAGAGGACGTTAAAAAGGCAGCACTCATAGATGCCGATGAATTGACCTCTACAGTGTCAAAACTTGGTCAATCGCTTAAAAAAATCAAAGATTTCTTGAACTCCGAGTTGAAGAATCTCGATGAAGACCATGAATTCCAAAACACAGTTGCAAGTTTTGTGGACCATTTTGAAGCTGATATTACATGGCTATTAGAGGAAGAGAGGAGGATTTCAGCTCTAGTAAAGAGCACAGCAGACTATTTCCACGGACACGCAGGAAGAGAAGAAGGTTTACGTTTGTTCATGATTGTACGTGACTTCTTGCTAATGTTAGATAAGGTATGCAAGGAGGTGAAGGATAATACAACAAAGATAGCGAGAGTTTCCATAAAAGAGTCTCCAGCTCATGCGTCATCTTCACCTTCTCCGTACATCCATCACACACCTTTGAATATACGTCAGCGGCTGTTTCCTGCAATCCTGGAGCGGAGAATGGTTGAATCCTCTTCAGATGATGAGAACCCTTCTTCATAA 2613 0.4416 MEFRRVCCALVYVILLCALATWSSSEGKRWWPVDFSQNHDGDIQLLPTMGEQVQTCCREALINKRNTEDFKSCISQSSKLRPEQITANVNIVINSLPVHLKCYLLECMQKRSVRFPGLEEELDSTARLMKCTETTFSCPNRRFLVGKPQAHVAISAHPVQAPIPGQARGSSLAPALSSYGPLPASSTSALSQLHDLLQPSPPPKNSYHPSYSSQHTDSMQKQQIIAAAIASGAAILLILFIYFCCVRGRRNKVDPKEGHKDDHPLLNLTTTNFSAGSSRKPVSLENKELIINNGKHPYLASEVSMKSEVHDSAVAEGLSPVAVGSTLPLKTSPRRSLPPPPTPPVPPPPPPVPTRPSQPLPAGPRPPEPPKLAQPPPLPKKGPGKDQLSPLWPNRNGTSGSGLGGETNGYSEGPKAKLKPFFWDKVLANPNQSMVWHEIRAGSFQFDEEMIESLFGCNNIDGNKTGNSRESPEPSVQYIRIIDPKKAQNLSILLKALDVTTDEVVDALREGKELPVGLLQTLLKMAPTIDEELKLRLFTGDLMLLSPAERFLKVLVDIPFAFKRLESIHYMATFLDDFASVKESLTTLQVASNKLRESRLFLKLLEAVLKTGNRMNDGTYRGGALAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGRRAVRMVKASQDLVEHSSEELEDQYHAIGLQVISGLSNELEDVKKAALIDADELTSTVSKLGQSLKKIKDFLNSELKNLDEDHEFQNTVASFVDHFEADITWLLEEERRISALVKSTADYFHGHAGREEGLRLFMIVRDFLLMLDKVCKEVKDNTTKIARVSIKESPAHASSSPSPYIHHTPLNIRQRLFPAILERRMVESSSDDENPSS* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01396 870 MobiDBLite consensus disorder prediction 391 406 - -
Pte6g01396 870 Pfam Formin Homology 2 Domain 413 804 IPR015425 -
Pte6g01396 870 PANTHER FORMIN-RELATED 158 856 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pte6g01396 870 MobiDBLite consensus disorder prediction 194 215 - -
Pte6g01396 870 MobiDBLite consensus disorder prediction 324 412 - -
Pte6g01396 870 SMART it6_source 408 819 IPR015425 -
Pte6g01396 870 Gene3D Formin, FH2 domain 414 831 IPR042201 -
Pte6g01396 870 MobiDBLite consensus disorder prediction 333 383 - -
Pte6g01396 870 ProSiteProfiles Formin homology-2 (FH2) domain profile. 408 830 IPR015425 -
Pte6g01396 870 SUPERFAMILY Formin homology 2 domain (FH2 domain) 339 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01396 Pte-Chr6 31848038 31852540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01396 412 858 FH2 protein (formin) Gene Family AT5G54650 59.607 3.66e-177 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01396 - - qsa:O6P43_000616 806.979