Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01390 ATGTTTTCTCCTGCACCAAATCCTCTGGTACACGTTATCTTAATTTTTCTTCCTCTTGTTCAATTTTACAGTTCCACTAAAGCTCAAGACGATATCTTCAGGTCGGTTAAATGCAACACTGCCATCAATTACACAACTGGTAGTCTATATGAATCAAATTTAAACCTTACTCTCAGCTACCTCATTGCCAATGCTACTCTTAATGGTTACGTCAACGTCACTGTTGGTCAAGATGCCAACACTGTTTATGGCATTTTACAGTGCAGAGGTGAATTCATTGATTCAGTTTGTGAATCATGTGCAACAACATCAGCTACAGAGATCAGACAGATCTGTATCAACCAGAAAGAAGCTTTCATTTTGAAAGCTCACTGTTCAATACAGTACTCAGACCAGCCTTTCTTCTCAATCATAGATAGCAGTCCAAGATTGGTATTAGCAAATTCACAGAATGCAAGCAATCCAGTTCTCTTCAATAAACAATTAGGAAGCTTGCTCAACGATGTTTCATCCGCCGCTGCATCAACTTCTTCAAGATTTGCAGTAGGAAGAATCCGCTACAAAGATTTCCTAAGCATATATTCTTTACAGCAGTGCACTAGATATATCACAGAAATGGACTGCTCGAACTGCTTACGATATATGATCAGTTATATTCCTGTCTGTTGTGACGGAAAAGAGGGTGGACAGCTCTATTCCACGAGCTGCAATTTTCGCTATGAAATCTATCCTTTCTTTCAAACTCCGCCGGCACCTCCACCTCCTTCAGTGTCGCAGACAAATTTTACTACTAACGGGGCCCCTAACACTAACACAACCATGAATAATGGTTCTGATATTGTTCCTGAAGATGATGAGAGAGGCTCGAGTTCTCTTTCAATCGGACTAAAAACACTCAGAATGGCCACAAAGAACTTCTCAGATGATAATAAACTTGGACAAGGGGGCTTTGGCCCAGTTTACAAGGGTGAACTGCCTGATGGAAAGAAAATAGCAGTTAAAAGACTTTCAAGTACCTCAGCTCAAGGTATGACGGAATTGAAGACAGAGGTGATGCTTGTGGCTAAACTGTTACACCGCAACCTGGTTAGACTATTGGGCTTCTGCCTTGACAATGAAGAGAAGCTACTTGTCTATGAATACTTACCTAATGGTAGCTTGGACAAAATGCTCTTTGATCAGAGGAGAAAATCTAGTCTAGACTGGGGAAAAAGGTATGAGATCATTCTTGGAATTGCTAGAGGACTACTCTATCTACATGAAGATTCTCAGATGAGGATTGTTCACCGGGATCTCAAAGCCAGCAATATCCTTTTAGATGAGTATATGAATCCCAAAATTTCTGACTTCGGATTGGCAAAACTATTTGGGGGAAGCCAGACTCATGGTAACACAAATCGGATTGCCGGAACTTATGGATACATGGCACCGGAGTATGTTAAGAAAGGGAACTTCTCGGCAAAATCTGATGTTTATAGCTTTGGCATTCTGGTTTTGGAGATAGTGGCTGGTCAAAAGTGCTCCAAGTTTGGAAATATAGTGAATCTTCAGAGTCAAGCATGGCAGCAATGGTCTAATGGAACAGCTATAGGAATATTGGACCCAGACCTTTGTGGTCAGTGGCAAGAACATGAAGTTCTGAAGTGCATTCATCTGGGTTTGCTATGCGTTCAAGCAACTGCTACGGATAGGCCAACCATGTCAGAGATTGTGACTATGCTTAGTGGTCACACGATGACCTCTCATGTACCATCTAAGCCAGGATATTATGTGTCCAGGACAACATCTGAATCAGATTTGGAAGGTGAAGATTTAGGCAACTCTCATTTTGATACATCTACGACCGAGCCCTTGCAACCATCTATTAACGAGGTTACCATGTCTGACTTTGATCCGAGGTAG 1902 0.4154 MFSPAPNPLVHVILIFLPLVQFYSSTKAQDDIFRSVKCNTAINYTTGSLYESNLNLTLSYLIANATLNGYVNVTVGQDANTVYGILQCRGEFIDSVCESCATTSATEIRQICINQKEAFILKAHCSIQYSDQPFFSIIDSSPRLVLANSQNASNPVLFNKQLGSLLNDVSSAAASTSSRFAVGRIRYKDFLSIYSLQQCTRYITEMDCSNCLRYMISYIPVCCDGKEGGQLYSTSCNFRYEIYPFFQTPPAPPPPSVSQTNFTTNGAPNTNTTMNNGSDIVPEDDERGSSSLSIGLKTLRMATKNFSDDNKLGQGGFGPVYKGELPDGKKIAVKRLSSTSAQGMTELKTEVMLVAKLLHRNLVRLLGFCLDNEEKLLVYEYLPNGSLDKMLFDQRRKSSLDWGKRYEIILGIARGLLYLHEDSQMRIVHRDLKASNILLDEYMNPKISDFGLAKLFGGSQTHGNTNRIAGTYGYMAPEYVKKGNFSAKSDVYSFGILVLEIVAGQKCSKFGNIVNLQSQAWQQWSNGTAIGILDPDLCGQWQEHEVLKCIHLGLLCVQATATDRPTMSEIVTMLSGHTMTSHVPSKPGYYVSRTTSESDLEGEDLGNSHFDTSTTEPLQPSINEVTMSDFDPR* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01390 633 MobiDBLite consensus disorder prediction 258 279 - -
Pte6g01390 633 Gene3D Transferase(Phosphotransferase) domain 1 382 586 - -
Pte6g01390 633 FunFam Cysteine-rich receptor-like protein kinase 10 142 245 - -
Pte6g01390 633 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Pte6g01390 633 SUPERFAMILY Protein kinase-like (PK-like) 293 593 IPR011009 -
Pte6g01390 633 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 273 631 - -
Pte6g01390 633 MobiDBLite consensus disorder prediction 607 626 - -
Pte6g01390 633 FunFam Cysteine-rich receptor-like protein kinase 10 269 381 - -
Pte6g01390 633 Gene3D Phosphorylase Kinase; domain 1 271 381 - -
Pte6g01390 633 MobiDBLite consensus disorder prediction 582 633 - -
Pte6g01390 633 Gene3D - 143 245 IPR038408 -
Pte6g01390 633 Gene3D - 31 134 IPR038408 -
Pte6g01390 633 SMART serkin_6 306 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01390 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Pte6g01390 633 Pfam Protein kinase domain 307 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01390 633 MobiDBLite consensus disorder prediction 582 596 - -
Pte6g01390 633 MobiDBLite consensus disorder prediction 251 289 - -
Pte6g01390 633 Pfam Salt stress response/antifungal 38 131 IPR002902 -
Pte6g01390 633 Pfam Salt stress response/antifungal 150 242 IPR002902 -
Pte6g01390 633 FunFam cysteine-rich receptor-like protein kinase 10 382 581 - -
Pte6g01390 633 ProSiteProfiles Gnk2-homologous domain profile. 32 134 IPR002902 -
Pte6g01390 633 CDD STKc_IRAK 312 574 - -
Pte6g01390 633 ProSiteProfiles Protein kinase domain profile. 306 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01390 Pte-Chr6 31826359 31829012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01390 38 634 Receptor kinase-like Gene Family AT4G05200 40.649 6.29e-166 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte6g01390 Pkinase 4.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01390 - - cit:102622122 696.812