Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01384 ATGAACGACCTGCTTACGGATTCTTTTGTTGGTGGGGGTAAAGGTCAGCCTCCTAGACGAAATGATATTGAGAGTGGAGTGCCCATCCCTGGTAGCATCGCTGACATGGGAATGGAAGCTTTTAATAAACAGATTCAAGAGGTTGAGAAACAGGTGGATAAACTTTCTGGGCTTCTTTTGAAACTGAAGGAAGCAAATGAGGAATCGAAGTCTATTACAAAGGCATCTGAAATGAAAGCTATCAAAAAGATGATGGAGAAAGACATTGATGAAGTAGGGAAGATTGCCCGCAATGTGAAGGCAAAATTAGAAGCAATAAACAAAGATAACTTAGCAAATAGACAAAAGCCTGGGTGTGAGAAAGGGACAGGTGTCGACAGAGCACGGATGAATGTGACCAATGCACTGACCAAAAGATTCAAGGAGATCATGATCGAATTTCAGACACTTAGACAAAGAATTCAAGATGAGTATCGTGAGGTTGTGGAAAGAAGAGTCATTACTGTGACTGGAACCAGGCCAGATGATGAGACAATTGACCACCTGATAGAAACTGGAAATAGTGAGCAAATTTTCCAGAATGCAATTCGAGAAATGGGTCGGGGACAGGTCTTAAATACTCTAGAAGAAATTCAGGAAAGACATGATGCTGTTAGAGACATTGAAAAAAAGCTTCTTGATTTACATCAGATTTATCTAGACATGGCCGTGTTGGTGGAGGCGCAAGGAGGGATTCTGGATAACATCGAAAGCCAGGTAAACAATGCAGTCATTCATGTCCAGAGTGGGACATCTGCACTTCAAATTGCTAAGAAACTGCAGAAGAACTCCCGTAAATGGATGTGCATTGCCATTATTATTATTTTGATAATTGTAGCTATTATATTTGTCAGTGTCATCCAACCTTGGAAGAACAAGGGTGCTTAG 927 0.4099 MNDLLTDSFVGGGKGQPPRRNDIESGVPIPGSIADMGMEAFNKQIQEVEKQVDKLSGLLLKLKEANEESKSITKASEMKAIKKMMEKDIDEVGKIARNVKAKLEAINKDNLANRQKPGCEKGTGVDRARMNVTNALTKRFKEIMIEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDHLIETGNSEQIFQNAIREMGRGQVLNTLEEIQERHDAVRDIEKKLLDLHQIYLDMAVLVEAQGGILDNIESQVNNAVIHVQSGTSALQIAKKLQKNSRKWMCIAIIIILIIVAIIFVSVIQPWKNKGA* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01384 308 SMART SynN_4 33 159 IPR006011 GO:0016020
Pte6g01384 308 SUPERFAMILY t-snare proteins 35 263 IPR010989 GO:0016020|GO:0016192
Pte6g01384 308 FunFam Syntaxin 132 201 301 - -
Pte6g01384 308 Gene3D - 199 301 - -
Pte6g01384 308 Gene3D - 34 162 - -
Pte6g01384 308 SMART tSNARE_6 203 270 IPR000727 -
Pte6g01384 308 Pfam SNARE domain 245 295 IPR000727 -
Pte6g01384 308 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 208 270 IPR000727 -
Pte6g01384 308 Pfam Syntaxin 41 243 IPR006011 GO:0016020
Pte6g01384 308 Coils Coil 38 68 - -
Pte6g01384 308 PANTHER SYNTAXIN 38 289 IPR045242 -
Pte6g01384 308 CDD SynN 38 195 IPR006011 GO:0016020
Pte6g01384 308 MobiDBLite consensus disorder prediction 1 25 - -
Pte6g01384 308 CDD SNARE_syntaxin1-like 207 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01384 Pte-Chr6 31781684 31785442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01384 1 306 SNARE and Associated Proteins AT3G03800 61.111 6.70e-123 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01384 K08486 - qsa:O6P43_000588 492.271