Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01370 ATGGCCAAAGGATGTGGACTCTCCATTGATTCAGATCCATCTGGGATGTTCTTCCCTCACATCCCTGTAATACTCAACTCATTTCCTCTACCAAAAAAAAAAAAAACCGACTGGAAATTCACTCCCAATATGGATACCACACTTATCAACACCGGCAGCAGCAGTAACACTAGGACTGCTCCTAGTACTATCCAGTTTCCAGATAACCTTAACTGTCCCCAAGATTATCAAAATTCACTAGTACCCTCTGGTGAAAAGCATAGGGTCATCGATGTGATGAACTTTTTCGCTGAAGATAACAAGGAGGGTGATGATGACAAGATTGCCTCTACCTCTGCCTATGCTGAAAAAATTGACAATAGTGCTCCTCCTGTTTTAGAATTATACACCGGTCTGCATCTTCTTACTACAAACACGGGTGGGAGTGACCAATCTGTAGTAGATGATGGTTTATCACCAAACTCAGAAGATAAAAGAGCAAATACGGAGCTTCTAGTTCTTCAAGCTGAACTGGAGCGAATGAAAGTGGAGAATCAGCGGTTGAAAGACATGTATGATAAGGTGTCCGACAATTACAATGCTCTGCATCTGCATTGCGTGAGTTTGATGCAGGAGCAGGGAGCTGGTCAGAACGTTGAAGAGACTGCAGATGCATTCAACGGGAGAGTAGAAGAGAAGAAACACAGTGCAAACAATGGTGTGGTGCTGCCACGAACATTTTTGGATCTGGGGTTGGCTGCTAATGCTGATGGAGATGAGTCATCCCACTGCTCATCATATGGAAGAAGCCTTAATCTTGGAACTAATGGAGAAGTAGCTTCCAAGAAATTAGCCTTCAGGAAGAATGGAACAAACGACGAAGCTGGAATGGAGTTTGATGGTGATAAGAACGGGTATGGTAGAGGAATGAGGAGAGAGGAGGATACCCCTGAACAAGGTTCTAGTACCAATAAGTCTGCTAGGCTCAGTCCAAAGAATGTAGATCAAACGGAAGCAACTATGAGGAAAGCTCGTGTTTCTGTTCGATCACTCTCTGAGGCACCAATGATAACTGATGGTTGTCAATGGCGGAAGTATGGACAGAAGATGGCTAAGGGAAATCCCTGTCCTCGAGCTTATTATCGCTGCACCATGGCCGCTGGTTGTCCAGTGAGAAAACAAGTACAGAGGTGTGCTGAAGATCGAAGCATCCTCATCACAACATATGAAGGCAATCATAACCACCCTTTGCCTCCAGCAGCCATGGCAATGGCACAAACCACTTCCTCTGCAGCACGTATGTTGCTTTCAGGATCCATGTCAAGCAGTGATGGCCTTATAAACTCTAATTTACTCACCAGGACGCTCCTGCCTTGCTCTTCAAGCATGGCAACTATTTCAGCTTCAGCTCCTTTCCCTACAATTACATTGGACTTGACACAGTCCTCAAACCCTTTGCAGTTCCAAAGGCAGCCAAATCAGTTCCATATCCCATTTCCAAATGGACCACAGAATTTTCTGAATACTCCTGCCTCACTTCTATCTCCAATATTTGGTCAGGCTCTCTATAACCAATCAAAGTTCTCTGGCCTGCAAATGTCGCAAGATGCTGACCCTTCTCAATCTTGCTACCTACCACAGCAAACACCTGCACATTTAGCTGATTCACTCAGTGTTGCAACAGCTGCCATTGCAGCGGACCCCAACTTCACGGCAGCTCTTGCCGCAGCCATCGGTTCTATCTTTGGTGGCGCGCATCCAAACAACAATACCAACAACAGTGCCAACCTCAACACTGCAGTCACTGCTAATAGCAATAGTAACGGCAACACAACAACTAGCAGCAGTTGTCAACAACAGCAATGGAAGCAATAA 1854 0.4531 MAKGCGLSIDSDPSGMFFPHIPVILNSFPLPKKKKTDWKFTPNMDTTLINTGSSSNTRTAPSTIQFPDNLNCPQDYQNSLVPSGEKHRVIDVMNFFAEDNKEGDDDKIASTSAYAEKIDNSAPPVLELYTGLHLLTTNTGGSDQSVVDDGLSPNSEDKRANTELLVLQAELERMKVENQRLKDMYDKVSDNYNALHLHCVSLMQEQGAGQNVEETADAFNGRVEEKKHSANNGVVLPRTFLDLGLAANADGDESSHCSSYGRSLNLGTNGEVASKKLAFRKNGTNDEAGMEFDGDKNGYGRGMRREEDTPEQGSSTNKSARLSPKNVDQTEATMRKARVSVRSLSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSSDGLINSNLLTRTLLPCSSSMATISASAPFPTITLDLTQSSNPLQFQRQPNQFHIPFPNGPQNFLNTPASLLSPIFGQALYNQSKFSGLQMSQDADPSQSCYLPQQTPAHLADSLSVATAAIAADPNFTAALAAAIGSIFGGAHPNNNTNNSANLNTAVTANSNSNGNTTTSSSCQQQQWKQ* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01370 617 SMART WRKY_cls 350 410 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g01370 617 MobiDBLite consensus disorder prediction 586 617 - -
Pte6g01370 617 FunFam probable WRKY transcription factor 31 335 412 - -
Pte6g01370 617 Pfam WRKY DNA -binding domain 352 409 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g01370 617 SUPERFAMILY WRKY DNA-binding domain 343 411 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte6g01370 617 Gene3D WRKY domain 335 412 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte6g01370 617 ProSiteProfiles WRKY domain profile. 345 411 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g01370 617 Coils Coil 164 191 - -
Pte6g01370 617 MobiDBLite consensus disorder prediction 313 330 - -
Pte6g01370 617 MobiDBLite consensus disorder prediction 284 312 - -
Pte6g01370 617 MobiDBLite consensus disorder prediction 284 333 - -
Pte6g01370 617 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 139 593 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01370 Pte-Chr6 31674952 31677273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01370 35 589 WRKY Transcription Factor Family AT1G62300 44.599 1.58e-126 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte6g01370 WRKY 2.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01370 - - qsa:O6P43_028660 680.633