Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01356 ATGGATGTCGATCCATCGACGTTGCCGGAAACCGATCACGATCCGGCCTTACCGAACCATCCTAGTACACCTCAGTCTCCGGCGGAAATGGAAAGAGGCGAGTTAGGGGACCAAGCACCGCCTTCCGGTGGATCTCAGTCGATGTCTCCGGTTCAGAACCAGCAGCTACATCAGCAACAGCAGCCTCCTCCTTCGCCGGTACACCAGATTCCGGTAGCTGGCCCGAGGCTTGCTCCAACTTACTCGGCTGTCAATGCAATTATAGAGAAGGAGGAGGACGGGCCTGGGCCGAGGTGTGGGCACACGTTGACAGCAGTCGCATCGGTAGGGGAGGAGGGCACCCCTGGGTACATTGGTCCAAGGTTGTTATTATTCGGTGGGGCAACTGAACTTGAAGGCAATTCAGCGGCTTCAGGGGCTCCTCCGTCAGCTGGAAGTGCCGGCATTCGTTTGGCTGGTGCCACAGCTGATGTGCACTGTTATGATGTATTAACTAATAAATGGTCTCGAATCACTCCGCTCGGAGAACCACCAACTCTGAGGGCAGCACATGCAGCAACTGCTGTGGGTACGATGGTTGTGGTTCAGGGTGGAATTGGTCCGGCTGGCTTGTCAGCAGAATGTCTTCATGTTCTTGACCTTACTCAGCAAAGGCCGAGATGGCATAGAGTCGTTGTGCAAGGCCCTGGACCAGGACCTCGATATGGGCATGCAATGGCTTTGGTGGGGCAGAGGTATCTAATGGTTATTGGTGGGAATGATGGGAAGAGGCCCCTCGCTGATGTGTGGGCTTTAGATACAGCAGCCAAACCTTATGAATGGCGCAAACTAGAACCAGAAGGAGAGGGTCCACCCCCATGCATGTATGCAACTGCAAGTGCGCGATCAGATGGCCTTCTCCTGCTTTGTGGAGGGAGGGATGCAAATGGTGTGCCACTTGCAAGTGCATATGGGCTTGCAAAACATAGGGATGGTCGCTGGGAATGGGCAATTGCTCCTGGTGTCTCACCTTCTCCTAGATATCAACATGCAGCGGTCTTTGTCAATGCAAGGCTCCATGTATCTGGAGGTTCTCTTGGTGGTGGACATGTGGTAGAGGACTCATCAAGTGTTGCAGTGTTGGATACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTCACCAGTCCTAGGACAGGGAGATATAGTGCGGATGCCGCAGGTGGAGATGCTTCTGTGCAGTTAACAAGACGTTGCAGGCATGCGGCGGCTGCAGTGGGTGACTTAATATTCATTTACGGCGGTTTACGTGGTGGAGTGTTGCTGGATGACCTATTGGTTGCTGAAGATCTTGCGGCAGCAGAGACAACAGCTGCTGCTTCACATGCAGCGGCTGCTGCTGCTGCTTCTACTGTTCAAGCAGCACGAAGGTATGGATTTGTTGATGAGAGGACAAGACAAACAATGCCAGAAACAGCTCATGATGGTGCAGTCGTTCTAGGAAATCCTGTTGCTCCTCCTGTAAATGGTGACATGTATACGGACATCAGCACAGAAAATGCCATGCTTCCAGGAACCCGGAGAACTACCAAAGGTGTTGAGTATCTAGTTGAAGCATCTGCGGCAGAAGCAGAGGCGATTACTGCTACACTAGCTGCTGCCAAGGCACGGCAGGTTAATGGAGAGGTTGAATTACCTGACAGAGATCGTGGAGCTGAGGCAACTCCAAGTGGCAAACAAATATCTTCCTTGATTAAACCTGATTCTACAGGGCCAAGCAGTGTGGCTCCTGGAGTTCGCCTTCATCATAGAGCAGTGGTTGTTGCAGCAGAGACAGGCGGTGCTTTAGGTGGAATGGTTAGACAGCTTTCAATTGATCAGTTTGAAAATGAGGGCAGGCGAGTCAGTTATGGAACTCCAGAAAATGCAACTGCAGCTAGAAAACTACTAGACCGGCAGATGTCAATCAATAGTGTACCAAAGAAGGTTATAGCACATCTATTAAAGCCTCGTGGATGGAAACCTCCAGTTCGCCGCCAATTTTTCTTAGACTGCAATGAAATTGCAGATCTGTGTGACAGTGCAGAGCGCATTTTTGCTGCCGAACCAAGTGTCTTGCAGCTTAGAGCACCTATTAAGATATTTGGTGATCTCCATGGGCAGTTTGGGGATCTTATGCGTCTTTTCGATGAGTACGGTGCACCATCAACTGCTGGAGATATAGCGTATATTGATTATCTCTTCCTTGGAGATTATGTTGATCGGGGTCAACATAGCCTTGAAACAATTACGCTTCTACTTGCATTGAAGGTAGAGTATCCAGATAATGTGCATTTAATACGTGGTAACCATGAGGCTGCAGATATTAATGCTCTCTTCGGGTTTCGGATTGAATGCATAGAGAGGCTGGGTGAGAGAGATGGAATTTGGGCATGGCACCGGATAAATCGGTTATTCAATTGGCTACCACTGGCAGCACTGATTGAAAAGAAGATTATATGTATGCATGGGGGTATCGGTCGTTCAATAAATCACATAGAACAAATAGAAAGTATTCAGCGGCCAATTACAATGGAGGCTGGTTCAATTGTTCTCATGGATCTATTATGGTCTGATCCAACAGAAAATGACAGTGTTGAGGGATTGCGGCCAAACGCTAGAGGACCAGGATTGGTTACTTTTGGGCCTGACCGTGTGATGGAGTTCTGCAATAACAATGACCTTCAGCTCATTGTTCGTGCACATGAGTGTGTAATGGATGGCTTTGAACGCTTTGCCCAGGGACATCTGATCACTCTTTTCTCTGCCACCAATTACTGTGGTACGGCAAATAATGCTGGAGCGATACTAGTTTTGGGTAGAGATCTTGTAGTGGTTCCCAAACTGATTCATCCATTGCCACCTGCAATGACATCTCCGGATGCATCACCAGAAGACCATATTGAAGACACATGGATGCAGGAGTTGAATGCTAATAGGCCACCAACACCAACTAGAGGTCGTCCTCAAGTAACAAATGAGCGGGGCTCTCTTGCTTGGATATAA 3027 0.4912 MDVDPSTLPETDHDPALPNHPSTPQSPAEMERGELGDQAPPSGGSQSMSPVQNQQLHQQQQPPPSPVHQIPVAGPRLAPTYSAVNAIIEKEEDGPGPRCGHTLTAVASVGEEGTPGYIGPRLLLFGGATELEGNSAASGAPPSAGSAGIRLAGATADVHCYDVLTNKWSRITPLGEPPTLRAAHAATAVGTMVVVQGGIGPAGLSAECLHVLDLTQQRPRWHRVVVQGPGPGPRYGHAMALVGQRYLMVIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANGVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGSLGGGHVVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVQLTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAAASTVQAARRYGFVDERTRQTMPETAHDGAVVLGNPVAPPVNGDMYTDISTENAMLPGTRRTTKGVEYLVEASAAEAEAITATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSTGPSSVAPGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFAAEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPDNVHLIRGNHEAADINALFGFRIECIERLGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHIEQIESIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAMTSPDASPEDHIEDTWMQELNANRPPTPTRGRPQVTNERGSLAWI* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01356 1008 MobiDBLite consensus disorder prediction 40 63 - -
Pte6g01356 1008 MobiDBLite consensus disorder prediction 984 999 - -
Pte6g01356 1008 Pfam Galactose oxidase, central domain 246 294 - -
Pte6g01356 1008 PRINTS Serine/threonine phosphatase family signature 923 939 IPR006186 GO:0016787
Pte6g01356 1008 PRINTS Serine/threonine phosphatase family signature 740 767 IPR006186 GO:0016787
Pte6g01356 1008 PRINTS Serine/threonine phosphatase family signature 901 921 IPR006186 GO:0016787
Pte6g01356 1008 PRINTS Serine/threonine phosphatase family signature 811 837 IPR006186 GO:0016787
Pte6g01356 1008 PRINTS Serine/threonine phosphatase family signature 773 797 IPR006186 GO:0016787
Pte6g01356 1008 PRINTS Serine/threonine phosphatase family signature 705 732 IPR006186 GO:0016787
Pte6g01356 1008 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1008 - -
Pte6g01356 1008 Pfam Calcineurin-like phosphoesterase 705 912 IPR004843 GO:0016787
Pte6g01356 1008 PIRSF STPPP_BSU1 43 1008 IPR012391 GO:0004721|GO:0009742
Pte6g01356 1008 FunFam Serine/threonine-protein phosphatase 77 274 - -
Pte6g01356 1008 SMART pp2a_7 677 961 IPR006186 GO:0016787
Pte6g01356 1008 Gene3D - 641 981 IPR029052 -
Pte6g01356 1008 MobiDBLite consensus disorder prediction 1 73 - -
Pte6g01356 1008 ProSitePatterns Serine/threonine specific protein phosphatases signature. 774 779 IPR006186 GO:0016787
Pte6g01356 1008 Gene3D - 206 467 IPR015915 GO:0005515
Pte6g01356 1008 MobiDBLite consensus disorder prediction 553 591 - -
Pte6g01356 1008 MobiDBLite consensus disorder prediction 570 584 - -
Pte6g01356 1008 SUPERFAMILY Metallo-dependent phosphatases 662 967 IPR029052 -
Pte6g01356 1008 Gene3D - 79 205 IPR015915 GO:0005515
Pte6g01356 1008 Pfam Galactose oxidase, central domain 97 174 - -
Pte6g01356 1008 SUPERFAMILY Kelch motif 152 442 IPR015915 GO:0005515
Pte6g01356 1008 FunFam Serine/threonine-protein phosphatase 322 465 - -
Pte6g01356 1008 FunFam Serine/threonine-protein phosphatase 641 981 - -
Pte6g01356 1008 MobiDBLite consensus disorder prediction 984 1008 - -
Pte6g01356 1008 CDD MPP_Bsu1_C 657 959 IPR041758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01356 Pte-Chr6 31572678 31583083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01356 669 904 Calmodulin-binding Proteins AT5G63870 29.412 3.36e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01356 - - zju:107403588 1741.47