Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01353 ATGGCGGCCTTCTTTCATGGAATTGGCTCAGAAATCCCATCCTCAGCTGATGGTCTGCAGACACTTTACCTAATGAATCCCAACAATTACGTACCTTACTCCGACAATACTCACCACCCTGCTCCTGCACCTGCACCTCCACCTCCCAACATGCTCTTCCTCAATCCTACGGTCCCCGGAAACGGGCTCAACCACTCTAATTTATCCCACGCGCTACCTCATTCAACCCACCAGCCCGTATTCGGTATTACCCTTCCGGCTAACATTGTCGGATCCAGTAACACAGATGATCCAAGCAGTTCATCATTGCTTACCCACCATGAAATCTCAGGCATACAAGGTCTGTCTGCTCCCCGAGTACAATACCACTTATGGGGACCGGTGATCGACCAGACAGCTTCATCCAACGTGGGTACAGCAACGACGAACTCTTGCGGGGCAAATACCGGCACCATGGACGTTGCATCTCATCAGATGGGGTTTCGCAGACCGAACCAGCAAGGCTTGTCATTGAGCCTCTCATCACAGCAAACTGCGTATCGGTCTCTTTCCGGAGAAATTGACGTATCCGATCAGGGGGGGCAGTTCCCGGCTCTCTCACCGACAAATGGAGGTGGCGGAAGTGACGATATTCGAGTTCCTGGCAACTCTTCAGCATCTATGTCTAATGGGATTACGGATATGCAGAATGTCATTTTGAGGTCTAAGTACTTGAAGGCTGCTCAAGAACTTTTGGATGAAGTAGTCAACGTGGGAAAAGCAATCAATAAAGTGGAAACAGAGGAGGGTCTTAAAGAGAAGATGGAAATAAACAATGATGAATCAAAGACAGGGATTGGAGATGTTTTTTGTGGTGCCAGTGAGAATAACAGTAATAGCAAGCAAGGAGCTGTGCTTACCACGGCTCAAAGACAAGAGCTTCAGATGAAGAAGACTAAACTTGTTAGCATGCTAGATGAGGCGGAGCAAAGGTGCAGGCAGTACCGCTACCAAATACAAAATGTTGTATCATCGTTTGAGCAGGCAGCAGGCTTAGGTGCGGCGAAGTCATACACATCCCTTGCTTTGAAGACCATCTCGAAGCAATTCCGATGCCTCAAAGACGCAATTTCCTCTCAAATAAAAGCAACAAGCCATAGCTTAGGTGAATATCATTGCTCAGGCGTCAAGATTGAGGGTTCTAGACTTAGGTTTGTTGATCATCACCTTCGGCAGCAGAGGGTAATGCAACAGCTGGGAATGATCCATCATAATGCTTGGAGACCTCAAAGAGGATTACCTGAAAGAGCTGTTTCTGTTCTTCGTGCCTGGCTTTTTGAGCATTTCCTTCACCCCTACCCTAAGGACACAGATAAAGTTTTGCTTGCCAAACAAACTGGACTTACTCGTAGCCAGGTATCCAACTGGTTCATAAATGCGCGAGTGCGGCTTTGGAAGCCAATGGTTGAAGAAATGTACATGCAGGAAACGAAGGAGCAAGAGCATAAAAATTCCGTGCATAACTCAGGCGGCGTAAAAGAATCAAACAAGGTGTTGCAATCAATAGATACCGATGAATCACATGCTGTTAGAAAAGATCAAATGAAAAGAACCCATTCCAAACCTGAAATATTGATCCCACATCAAAATGTTTCTGCAGCTGAAATATCGATATCTTCGATGTCGACTTCTCCTTCAGGCGGATGCCTACAATCTCATTCCGGTTTTAACCTTTTAGGCTTTGGTGATATGCAAAGAAGTCTACACAAGACTAGGAATTCTGAGATGCAAAATTCTCCTAGTAGCACTTTGTCAGCAGACATGGAGATAAATCCTGGAGAGAATGATAGAGATGTTGGTGCAGAATTTGGAAATTACCAGCAAAGCAAGGGTGGATACTCATTAACAAGAGAAGATCCAAATCAAGGTGGTTTTGCACCGGGAGCATATTCTATGGGAGATATTGGAAGGTTCAACCCAGAGGACTTAACCCCTAGGTTCTGTGGAAATGGTGTTTCTCTCACCCTGGGTCTTCCCCGCAGTGAGAATCTCTCTCTCTCAGGAAACCAGCAGGGGATAGGATACCTCCCACTCCAAAACATGCAGTTAGGCAAGCTTGAGATTGGAGCTACTGGGAAAGAGTTCTGTGCAATTAATACCCCGCAGTCTTCACATTCAAGCAATGGTTTTGACAACATTGACATCCAAAACAGAAGAGGATTTGCTGCTCAATTGTTGCCAGACTTTGTGGCTCGATGA 2238 0.4598 MAAFFHGIGSEIPSSADGLQTLYLMNPNNYVPYSDNTHHPAPAPAPPPPNMLFLNPTVPGNGLNHSNLSHALPHSTHQPVFGITLPANIVGSSNTDDPSSSSLLTHHEISGIQGLSAPRVQYHLWGPVIDQTASSNVGTATTNSCGANTGTMDVASHQMGFRRPNQQGLSLSLSSQQTAYRSLSGEIDVSDQGGQFPALSPTNGGGGSDDIRVPGNSSASMSNGITDMQNVILRSKYLKAAQELLDEVVNVGKAINKVETEEGLKEKMEINNDESKTGIGDVFCGASENNSNSKQGAVLTTAQRQELQMKKTKLVSMLDEAEQRCRQYRYQIQNVVSSFEQAAGLGAAKSYTSLALKTISKQFRCLKDAISSQIKATSHSLGEYHCSGVKIEGSRLRFVDHHLRQQRVMQQLGMIHHNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDTDKVLLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMQETKEQEHKNSVHNSGGVKESNKVLQSIDTDESHAVRKDQMKRTHSKPEILIPHQNVSAAEISISSMSTSPSGGCLQSHSGFNLLGFGDMQRSLHKTRNSEMQNSPSSTLSADMEINPGENDRDVGAEFGNYQQSKGGYSLTREDPNQGGFAPGAYSMGDIGRFNPEDLTPRFCGNGVSLTLGLPRSENLSLSGNQQGIGYLPLQNMQLGKLEIGATGKEFCAINTPQSSHSSNGFDNIDIQNRRGFAAQLLPDFVAR* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01353 745 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 144 502 - -
Pte6g01353 745 Pfam Associated with HOX 231 371 IPR006563 -
Pte6g01353 745 MobiDBLite consensus disorder prediction 583 634 - -
Pte6g01353 745 MobiDBLite consensus disorder prediction 512 536 - -
Pte6g01353 745 Gene3D - 423 502 - -
Pte6g01353 745 MobiDBLite consensus disorder prediction 491 539 - -
Pte6g01353 745 SUPERFAMILY Homeodomain-like 421 487 IPR009057 -
Pte6g01353 745 FunFam BEL1-like homeodomain protein 9 423 485 - -
Pte6g01353 745 Pfam Homeobox KN domain 437 476 IPR008422 GO:0003677|GO:0006355
Pte6g01353 745 Coils Coil 304 324 - -
Pte6g01353 745 SMART prehox3 226 372 IPR006563 -
Pte6g01353 745 ProSiteProfiles 'Homeobox' domain profile. 417 480 IPR001356 GO:0003677
Pte6g01353 745 SMART HOX_1 420 484 IPR001356 GO:0003677
Pte6g01353 745 MobiDBLite consensus disorder prediction 584 602 - -
Pte6g01353 745 CDD homeodomain 420 481 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01353 Pte-Chr6 31551814 31555163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01353 1 744 Homeobox Transcription Factor Family AT2G35940 41.009 2.08e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte6g01353 POX 4.2e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01353 - - qsa:O6P43_028591 748.043