Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01350 ATGGAGGGTAGCCACTGGAAATGGCATATCTGCATTCTTGTTGGTTCAGCATTGCTTACAGCGGCATACGGTGCTACAGACCCTGGTGACCTCAAGGTTTTGGTTGATTTCAAAAATGGTATGAAGAATCCAGAGGTTCTACAATGGCCTGACAATGGAGTAGATCCCTGTGGCCCTCCTTCTTGGCCTTACGTTTACTGCTCAGGTAATCGGGTCACACAGATTCAAGCCAAAAACCTCAATCTTAAGGGACATTTACCTCAAAATTTCAACCAGCTCTCAGAACTCTATAATTTAGGCCTTATGAATAATTCATTGAGTGGGATGTTGCCTACGTTTAAGGGGTTAAGCAAATTGGAATATGCTTTCTTGAATGATAATCAATTTGATGCCATACCTTCTGATTTCTTCAGTGGACTTGCCAGTCTTAGGGTGTTGGGGTTGGGTGGCAATCCGTTGAATGCAAGTAGTGGATGGTCTTTTCCTCATGATTTAGCTAATTCTACGCAATTAACAGATGTGTCACTAGTACGATGTAATTTGATTGGAACTTTGCCAGATTTTCTAGGAACATTGCCATCTTTGAATGCTTTGATGCTTTCTTACAACAGATTATCTGGTGGCATTCCTGCAAGTTTTAAACAATCTACATTGAAGACATTGTGGTTAAATAATCAAGATGGTGTTGGGATGAATGGTAGCATTGATGCAATTGCATCCATGCAATTTCTAACAAAGGCCTGGCTTCATGGGAATCAATTCAGTGGGCCAATTCCTGAGACAATTGGGAATCTTGCTTCTTTGGAAGAACTCAACCTCAACAAAAACCAACTTGTTGGCATGATCCCGCGGAGCTTAGCGAATATGGAGCTCCGTTCACTGGTGTTGAATAACAACTATTTCATGGGGCCAATACCTAAATTTAAGGCTGCTAATGTCTCTTATGATTTTAACAGCTTTTGTCAAACCAAACCTGGCGTTCAGTGTGCTCCTGAAGTTACCGTGCTACTGGATTTTCTTGGTGATCTGAATTACCCTCTGAGTCTTGTTAGTAAATGGTCTGGTAACGACCCATGTGCTGGTCCATGGTTTGGTTTGAACTGTGATCCCCGGTCCAAGGTGTCTGTCATCAATCTCCCAGGATATCAGCTGAATGGAACTCTTAGTCCTTCAATTGCAAAGCTTAGTTCTCTCCTTGAAATTCGGCTTGGAGGAAACAATATACACGGCAGAATTCCCAGCAATTTAACTGGTTTGCAGTTACTGAGATTGTTGGATTTGAGTGGAAACAATATTGAGCCTCCGTTGCCAAAGTTTCATGACGGAGTGAAGCTCTTCACAGAGGGCAATCCACTTGTTGCCAATCGAACTGAAAATGTTCCCCCATCTGATACCACCCCATCAAAGAAATCACCATCAGAAACTCCTCCATCACCATTTTACAACCGGTCATCATCCTCTATCACCAGCTCTACATACAGGGTACAAAAGAGCTCTAGGAATTTCACAACAGTAGTACTTGCTGGAGTGGCAACCTTTGCAGCAGTAGTTTTGGTGGTGGTTTCTATAACAATTTGTTGCTGTAAAAAGAAGAATGTTTCTATTAAAGCTCCTGGATCTGTTGTCGTTCATCCTGCGGCTCCATCTAATCCAGAAAGCAAGATTACAATTGCTGTTTCAAATGATAAAGAGGAGGAGAAATCAATTCAAACTACCACTACTATTGATAACATCAGCATAGGAACTCAGAATTCTAGCGTGATTAATGATGGAAATATGGTTATCTCAGCTCAAGTTCTACGAGAAGTAACCAACAATTTTGCCGCAGAGAATGAGCTTGGCCATGGTGGCTTTGGAACAGTGTACATGGGTGAGCTTGAAGATGGAACAAAAGTAGCAGTGAAAAGAATGGAGGGTGGAGCTATTACCAGCAAAGGCTTTGATGAATTCCAGTCTGAAATTGCTGTCCTTTCCAAGGTCCGCCACAAACATTTGGTATCTCTTTTAGGATATTCTATCGAAGGCAATGAAAGGCTCCTGGCTTATGAATATATGCCCCAGGGAGCTTTGAGTAAGCATCTGTTTCATTGGAAGAGCCTGAATCTGGAACCATTGAGTTGGACTTGTAGGCTCACAATTGCATTAGATGTTGCTAGAGGGATAGAATATCTTCATAGTCTTGCGTGTCAAACGTTCATACATAGAGATCTTAAATCTTCTAACATTCTTCTGGGTGATGATTTTCGAGCAAAAGTTTCAGATTTTGGATTGGTGAAGCTTGCACCAGACGGTGGAAAATCTGTTGTAACAAAACTTGCTGGGACATTTGGATACCTTGCACCTGAATACGCAGTAATGGGAAAAATCACAACTAAAGCTGATGTATTCAGCTATGGTGTGGTGCTGATGGAGCTTCTGACTGGCCGAATGGCACTAGATGAGAGTCGTCCTGAGGAGACCAGGTACTTAGCTGAGTGGTTTTGGAGAATCAAATCGAGCAGACATCAAGTTATGGCTGCCGTTGATCCAGTTGTTGATGCTACTGCTGAGAGCATTTCAATCATAGCTGAGCTAGCTGGTCATTGCATAGCGAGGGAGCCACTCCATCGACCTGATATGGGTCACGTTGTAAATGTGTTGGCACCGCTCACTGAGAAGTGGAAACCCTTTGACGAAGAATCAAGCTTCAGTGGCATCGACTATAGCCTAGGTCTCCCTAAGATGTTGAAGATGTGGCAGGATGCAGGAAGCAGAGGTGTCAGCTATTCAAGTCTTGAAGACAGCAAAGAAAGCATACCAGCAAGGCCTTCAGGGTTTGCAGAGTCCTTTACTTCCATGGATGGCCGATGA 2850 0.4291 MEGSHWKWHICILVGSALLTAAYGATDPGDLKVLVDFKNGMKNPEVLQWPDNGVDPCGPPSWPYVYCSGNRVTQIQAKNLNLKGHLPQNFNQLSELYNLGLMNNSLSGMLPTFKGLSKLEYAFLNDNQFDAIPSDFFSGLASLRVLGLGGNPLNASSGWSFPHDLANSTQLTDVSLVRCNLIGTLPDFLGTLPSLNALMLSYNRLSGGIPASFKQSTLKTLWLNNQDGVGMNGSIDAIASMQFLTKAWLHGNQFSGPIPETIGNLASLEELNLNKNQLVGMIPRSLANMELRSLVLNNNYFMGPIPKFKAANVSYDFNSFCQTKPGVQCAPEVTVLLDFLGDLNYPLSLVSKWSGNDPCAGPWFGLNCDPRSKVSVINLPGYQLNGTLSPSIAKLSSLLEIRLGGNNIHGRIPSNLTGLQLLRLLDLSGNNIEPPLPKFHDGVKLFTEGNPLVANRTENVPPSDTTPSKKSPSETPPSPFYNRSSSSITSSTYRVQKSSRNFTTVVLAGVATFAAVVLVVVSITICCCKKKNVSIKAPGSVVVHPAAPSNPESKITIAVSNDKEEEKSIQTTTTIDNISIGTQNSSVINDGNMVISAQVLREVTNNFAAENELGHGGFGTVYMGELEDGTKVAVKRMEGGAITSKGFDEFQSEIAVLSKVRHKHLVSLLGYSIEGNERLLAYEYMPQGALSKHLFHWKSLNLEPLSWTCRLTIALDVARGIEYLHSLACQTFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGGKSVVTKLAGTFGYLAPEYAVMGKITTKADVFSYGVVLMELLTGRMALDESRPEETRYLAEWFWRIKSSRHQVMAAVDPVVDATAESISIIAELAGHCIAREPLHRPDMGHVVNVLAPLTEKWKPFDEESSFSGIDYSLGLPKMLKMWQDAGSRGVSYSSLEDSKESIPARPSGFAESFTSMDGR* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01350 949 SMART serkin_6 607 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01350 949 PANTHER OSJNBA0070M12.3 PROTEIN 12 949 - -
Pte6g01350 949 Gene3D Ribonuclease Inhibitor 331 457 IPR032675 -
Pte6g01350 949 Pfam Protein tyrosine and serine/threonine kinase 610 879 IPR001245 GO:0004672|GO:0006468
Pte6g01350 949 FunFam Receptor-like kinase TMK4 28 326 - -
Pte6g01350 949 SUPERFAMILY L domain-like 330 439 - -
Pte6g01350 949 Gene3D Phosphorylase Kinase; domain 1 568 684 - -
Pte6g01350 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Pte6g01350 949 FunFam receptor protein kinase TMK1 569 684 - -
Pte6g01350 949 Gene3D Transferase(Phosphotransferase) domain 1 685 897 - -
Pte6g01350 949 FunFam PTI1-like tyrosine-protein kinase 3 685 894 - -
Pte6g01350 949 Pfam Leucine rich repeat N-terminal domain 331 369 IPR013210 -
Pte6g01350 949 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pte6g01350 949 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Pte6g01350 949 SUPERFAMILY Protein kinase-like (PK-like) 587 887 IPR011009 -
Pte6g01350 949 MobiDBLite consensus disorder prediction 920 949 - -
Pte6g01350 949 Gene3D Ribonuclease Inhibitor 29 327 IPR032675 -
Pte6g01350 949 CDD STKc_IRAK 613 883 - -
Pte6g01350 949 ProSiteProfiles Protein kinase domain profile. 607 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01350 949 SUPERFAMILY L domain-like 26 308 - -
Pte6g01350 949 SMART LRR_typ_2 395 419 IPR003591 -
Pte6g01350 949 SMART LRR_typ_2 140 163 IPR003591 -
Pte6g01350 949 SMART LRR_typ_2 116 139 IPR003591 -
Pte6g01350 949 SMART LRR_typ_2 265 288 IPR003591 -
Pte6g01350 949 SMART LRR_typ_2 192 215 IPR003591 -
Pte6g01350 949 FunFam Leucine-rich repeat receptor-like kinase 331 456 - -
Pte6g01350 949 Pfam Leucine rich repeat 95 153 IPR001611 GO:0005515
Pte6g01350 949 MobiDBLite consensus disorder prediction 453 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01350 Pte-Chr6 31525659 31529154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01350 82 894 Receptor kinase-like Gene Family AT1G55610 29.445 5.97e-78 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pte6g01350 PK_Tyr_Ser-Thr 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01350 K00924 - cit:102609770 1254.58