Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01343 ATGGGAAACAAGCCTGTGAAGGAAGAGAAGAAAGATAGAGATATTCTATTATTGAAAGTTGTTCCTCCGCTGGATCGCACATATACTAGATGGCTTGCTCGAGAGCTTGAAAGGAAGTATAGATTCATGCCAAAGAATCCTCGTGCATTGGAGCCTCCAGATCACCAATTGAAGCGGAAGAATAATGCAGCAGATCTGGAAGCTGATTCTGGTGATCAGGTAACTGTTCCTGGCTCAACAGATGTATTAATGGTCCCTTCCAGACACCTGTTTCAGGAAAGGTTGCTAGAGGTAAAGGTTCAAAAGTCACAAAAGGCAGCAGAGCTGGACCTAAAACTCCAGCTTCAAATGCTGGGCAACATATATCTCATATTTATTTCAATCAAGCAGGTTCTCCATCAGGCAACTCTCACTCCACCTGGTTCATGTCACTATGATAGCTCCCTAGGTCCATTGACAAACAAGTTCATAAATTTGATCAAGCAAGCAGAAGATGGTATGCTAGATCTGAATAAAGCTGCCGGTACATTAGAGATGTGCCCTTATCGTCGGGTGGAAAAATCAGATTATGATGTTCACGTTAGCTGA 588 0.4286 MGNKPVKEEKKDRDILLLKVVPPLDRTYTRWLARELERKYRFMPKNPRALEPPDHQLKRKNNAADLEADSGDQVTVPGSTDVLMVPSRHLFQERLLEVKVQKSQKAAELDLKLQLQMLGNIYLIFISIKQVLHQATLTPPGSCHYDSSLGPLTNKFINLIKQAEDGMLDLNKAAGTLEMCPYRRVEKSDYDVHVS* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01343 195 PANTHER TRANSCRIPTION FACTOR E2F 108 183 IPR015633 GO:0000978|GO:0006357
Pte6g01343 195 Gene3D - 139 192 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01343 Pte-Chr6 31472278 31475410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01343 81 179 E2F-DP Transcription Factor Family AT2G36010 43.689 1.63e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01343 - K06620 egt:105970172 93.2041