Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01336 ATGGAGGAAGAGGAGTATCCGCCTGGTTTTCGCTTTTACCCAACAGAGGAAGAGCTGGTGGATTTCTATCTTCAAAAGAAGTTAGAAGGAATCAGTACAACCGGAATGGATCGTGTAATTCCTGTCATTGACATCTATAGCGTGGAGCCCTGGGACCTTCCACAAGTTGCAGGAGAGAAGTGTCGTGCAGATAGAGAGCAATGGTTTTACTTCACACCAAGGCAAGAGAAAGAAAACAAAGGAGGAAGACCGAGCAGAAGCACAGCCACAGGATACTGGAAAGCCACAGGTTCTCCAGGATATGTTTACTCATCAGATAAGAAGATCATTGGGGTGAAGAAAACCATGGTCTTCTACAAGGGGAGAGCTCCGAATGGAAGGAAAACCAAGTGGAAGATGCACGAGTATAGAGCTATTGCAACAAGGCCTGACCAATCAACCAGCACTCTTGTTCCCAAGTTAAGGGATGAATTCAGTTTGTGCCGAGTTTATGTGATATCGGGAACTTTTCGAGCATTTGATCGCCGGCCAACAGAGTCATCGTCAACAAAGTCCTTACAGGCTCATGGTGACAAGGATGTTGCAAGTGCTCAGGACATTCCAGCGGTGGAGAAATCAAACTTATCTGATACTTCTCACTCAGGGGGGGACCAATATTTGAGCTTCCTTGATTTTGGGGGGAGTAGCACTAACTGGGAAATGTTGCAAAGTTTAGAACAACCCTTGTGGGAATGGGAACAATTAAACTGGCCGTAG 756 0.4603 MEEEEYPPGFRFYPTEEELVDFYLQKKLEGISTTGMDRVIPVIDIYSVEPWDLPQVAGEKCRADREQWFYFTPRQEKENKGGRPSRSTATGYWKATGSPGYVYSSDKKIIGVKKTMVFYKGRAPNGRKTKWKMHEYRAIATRPDQSTSTLVPKLRDEFSLCRVYVISGTFRAFDRRPTESSSTKSLQAHGDKDVASAQDIPAVEKSNLSDTSHSGGDQYLSFLDFGGSSTNWEMLQSLEQPLWEWEQLNWP* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01336 251 Pfam No apical meristem (NAM) protein 7 137 IPR003441 GO:0003677|GO:0006355
Pte6g01336 251 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 189 - -
Pte6g01336 251 Gene3D NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Pte6g01336 251 ProSiteProfiles NAC domain profile. 6 166 IPR003441 GO:0003677|GO:0006355
Pte6g01336 251 MobiDBLite consensus disorder prediction 176 199 - -
Pte6g01336 251 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01336 Pte-Chr6 31393257 31395136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01336 4 252 NAC Transcription Factor Family AT5G22380 56.627 1.43e-93 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte6g01336 NAM 9.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01336 - - qsa:O6P43_028548 330.102