Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01322 ATGAATGAACAAGGGTCTGCTTTCGATTACGGAGAGCTAGAAGAGGCCATTGTGCTACAAGGAGTTAATATTAAAAATGATGAAGCCAAAGCACCTTTATTCACAGCAAGACCTGCAGCTACACTGGAAATGTTCCCTTCTTGGCCAATACGATTTCAGCAAACCCCAAGAGGAAGCTCAAAGTCAGGAGGAGAGAGCAGTGAGTCACGAGCGGCAAACACGGCCTCAAGCAAGACTGAGGCCCAGTTCGAACCAGAATCACCTATGAGCATAAAGGCAACTTCTTCGGATCATAAGGCTTTAAATCAGAATCATCTGCAGCTTCAACAGCTAAAGCAGCAGGTGCAACAAGAGATGGTAAACGATAACTCAAGAATGGGCACATCGCCTAATCAATCAGCTGCGGAAGTACCACAGGAAAAGGGAGCTGGTTCCACATCATCAGAGAAACAACATGACGTCAAGACACTGAGACGTTTAGCTCAGAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTCCAGCAACTAGAGTCCTGTAGAATTAAGCTCACTCAGCTTGAACAAGACTTGCAAAGAGCACGGTCTCAGGGACTCTTCTTGGGCTGTGGAAGCACTGCTGGGAACATTAGCTCTGGAGCTGCAATATTTGATATGGAATATCAGAGGTGGTTAGAAGATGATCACCGTCACTTAGCGGAGCTCCGGACAGGGTTGCATGCACTGCCGGACGGTGACCTGAGACTAGTAGTGGACGGTTACCTCTCACATTACGATGAGATTTTCAGGCTGAAGGATATGGCTGCCAAGTCAGATGTCTTTCATCTCATTACCGGGATGTGGACTACCCCAGCTGAACGCTGTTTCCTTTGGATGGGAGGCTTTAGACCATCAGAGCTCATCAAGATGCTGATACACCAACTAGAGCCTCTAGCTGAACAGCAAATTGTGGGAATCTACAGTCTCCAACAGTCGTCGCAGCAGGCTGAGGAAGCTCTCTCTCAAGGCCTGGAACAACTACGGCAGTCCCTTGTTGACACTGTTGCTAGTGGCCCAGTCATTGATGGAGTACAGCAGATGGTTGTTGCTGCAAGCAAGCTTGCCAATCTCGAGGGTTTTGTCCGCCAGGTACGTGCTAACAAATTTTCACAAAAACAAATATAG 1176 0.4779 MNEQGSAFDYGELEEAIVLQGVNIKNDEAKAPLFTARPAATLEMFPSWPIRFQQTPRGSSKSGGESSESRAANTASSKTEAQFEPESPMSIKATSSDHKALNQNHLQLQQLKQQVQQEMVNDNSRMGTSPNQSAAEVPQEKGAGSTSSEKQHDVKTLRRLAQNREAARKSRLRKKAYVQQLESCRIKLTQLEQDLQRARSQGLFLGCGSTAGNISSGAAIFDMEYQRWLEDDHRHLAELRTGLHALPDGDLRLVVDGYLSHYDEIFRLKDMAAKSDVFHLITGMWTTPAERCFLWMGGFRPSELIKMLIHQLEPLAEQQIVGIYSLQQSSQQAEEALSQGLEQLRQSLVDTVASGPVIDGVQQMVVAASKLANLEGFVRQVRANKFSQKQI* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01322 391 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 158 173 IPR004827 GO:0003700|GO:0006355
Pte6g01322 391 PANTHER TRANSCRIPTION FACTOR TGA9 86 380 - -
Pte6g01322 391 Pfam bZIP transcription factor 153 195 IPR004827 GO:0003700|GO:0006355
Pte6g01322 391 MobiDBLite consensus disorder prediction 112 145 - -
Pte6g01322 391 SUPERFAMILY Leucine zipper domain 155 192 IPR046347 GO:0003700|GO:0006355
Pte6g01322 391 Gene3D - 154 203 - -
Pte6g01322 391 Coils Coil 174 201 - -
Pte6g01322 391 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 153 197 IPR004827 GO:0003700|GO:0006355
Pte6g01322 391 MobiDBLite consensus disorder prediction 112 156 - -
Pte6g01322 391 SMART brlzneu 151 216 IPR004827 GO:0003700|GO:0006355
Pte6g01322 391 MobiDBLite consensus disorder prediction 47 98 - -
Pte6g01322 391 Pfam Seed dormancy control 235 309 IPR025422 GO:0006351|GO:0043565
Pte6g01322 391 CDD bZIP_HBP1b-like 155 206 - -
Pte6g01322 391 FunFam BZIP family transcription factor 154 203 - -
Pte6g01322 391 Coils Coil 98 118 - -
Pte6g01322 391 ProSiteProfiles DOG1 domain profile. 218 391 IPR025422 GO:0006351|GO:0043565
Pte6g01322 391 MobiDBLite consensus disorder prediction 52 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01322 Pte-Chr6 31323445 31327870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01322 102 380 bZIP Transcription Factor Family AT1G08320 67.254 1.58e-131 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte6g01322 DOG1 9.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01322 K14431 - pvy:116118248 542.347