Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01314 ATGGCTGAGGAACACAGATGCCAAGCTCCACGTCTATGCGCTAACAACTGCGGATTCTTTGGAAGTCCAGCCATGCAGGATTTCTGCTCCAAATGTTACAGAGATTTGCAGCTTAAGGAACAGCAATCTTCATCAGCAAAGCTGGCGCTCAACAAGTCTCTGAATCCTTCGTCCTCGACCGTGTTGCCGGCATCGCTGCCGTCACCATCGCCTGCAGAGACGAATTCGTTTGCTTCATCTCAGCGGGTTGTGGATCTACCGGTTGTCGTGGAGGACAAGAGCATGCCGTGTGCGCCCTCTCAGCCCAACAGGTGCAGGATGTGCAGGAAGCGCGTTGGTCTCAACGGATTCAAGTGTCGGTGCGAGATGATCTTTTGCGGGTCGCACCGGTACCCGGAGCAACATGCTTGCGAGTTTGATTTCAAGAGTATGGGTCGGGAGCAGATCGCGAAAGCTAACCCGCTAGTGAAAGCGGAGAAACTGGAGAAGATATGA 495 0.5333 MAEEHRCQAPRLCANNCGFFGSPAMQDFCSKCYRDLQLKEQQSSSAKLALNKSLNPSSSTVLPASLPSPSPAETNSFASSQRVVDLPVVVEDKSMPCAPSQPNRCRMCRKRVGLNGFKCRCEMIFCGSHRYPEQHACEFDFKSMGREQIAKANPLVKAEKLEKI* 165
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01314 164 MobiDBLite consensus disorder prediction 54 78 - -
Pte6g01314 164 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Pte6g01314 164 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Pte6g01314 164 Gene3D - 77 160 IPR035896 -
Pte6g01314 164 Pfam AN1-like Zinc finger 105 141 IPR000058 GO:0008270
Pte6g01314 164 ProSiteProfiles Zinc finger AN1-type profile. 99 145 IPR000058 GO:0008270
Pte6g01314 164 Gene3D - 1 60 - -
Pte6g01314 164 SUPERFAMILY AN1-like Zinc finger 93 159 IPR035896 -
Pte6g01314 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 59 - -
Pte6g01314 164 FunFam Zinc finger AN1-type containing 6 78 160 - -
Pte6g01314 164 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Pte6g01314 164 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 164 - -
Pte6g01314 164 SMART AN1_Zf_4 105 142 IPR000058 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte6g01314 Pte-Chr6 31262197 31263569 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01314 1 165 C2H2 Transcription Factor Family AT3G52800 50.568 3.84e-46 147
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01314 - - pcin:129295477 216.083