Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01300 ATGGGGTCGGATGACTTGACCGACGACCTTCAAAGTCTAAGCTTCACTTCCAGTGCTACTACCACTACTACTGCAACCACAGACATCAAACGCAGCACAAGCTCTTGTTCTGAAACAACACTAACTGCATCTTCTTCCCTTCACCATGACTCACAGCCAACTTCGAAACCCCACGCTCCTTCTTCCGACCCGTGCTGGTCAGCCATTCATAGGATTCGATCAGAGTCTCCACACCATCTTGTATCCCTTTCAGACCTCCGCTTCTCCAGTCGTATTGGCGCCGGTGATATAGGCTGCGTGTACCTTGCTGAACCGAAATGCTGTGATGAAGGCGACACCGCCGTTTTCTTTGCTGCCAAAGTGATGGACAAGAACGAACTCGTCAGTCGGAGCAAGGAGGGGCGGGCGAGGACGGAGAAGGAAATTCTCGAACTGTTGGATCATCCTTTTTTGCCAACTCTATATGCTTGCATCGACTCGCTCAAATGGCTTTGTCTGCTGACTGAGTTCTGTCCGGGCGGTGACCTCCACGTGCTCCGACAACGCCAGCCCCACAAACGGTTCCTGGAGCCCGCCGTCAGTCATGAACGAGGAGATCCGAGCAAATCCGGATTCATATTCCGGGGTTCCCTTAAAACTTTGAGATGGTTCTACGCATCAGAGGTGGTGATAGCCATAGAATATCTTCACATGTTGGGTATAATCTATCGTGATCTCAAACCCGAGAACGTTCTGGTTCGTTCCGACGGGCACATTATGCTCACAGATTTTGACCTCTCATTAAAATGTGATGAATCCACCTCAGCAGCTCAGATAATCTCTGATGAGAATCCACAGGCAACAGGTCCACAGAAAGACAACCCATCTCACCCACCTCGTTTTGCTTCGTCGTCGTGCATAATACACAACTGCATAGTCCCCGCTGTATCGTGCTTCCATCCTAAACGCAAACGCAAGAAGAAGATTGGGCAGCGCAATGGCCCAGAGTTTGTAGCAGAACCAATTGACGTACGGTCCATGTCATTTGTTGGCACCCACGAGTACTTGGCACCGGAGATAGTGTCCGGTGAGGGTCATGGTAGTCCTGTGGATTGGTGGACATTGGGAATATTTATATTTGAACTATTTTATGGTTTCACACCCTTTAGGGGCGTGGATAATGAGTTAACCCTAGCAAACATAGTAGCTAGAGCACTCGAGTTCCCCAAGGAACCGGCCGTGCCTGCCACTGCCAAGGATCTCATATCCCAATTGTTGTCTAAAGATCCGGCCAGACGGCTTGGGTCGACGATGGGTTCTTCAGCCATCAAGCATCATCCATTCTTTCAAGGGGCCAACTGGGCATTGTTAAGATGCACAACCCCTCCATTTATTCCTCCCCATTTTTGTAAAGAAGCCACGTCTGATGGTAGTTGTCCAGAAACTCCCATGGATTATTATTGA 1443 0.4955 MGSDDLTDDLQSLSFTSSATTTTTATTDIKRSTSSCSETTLTASSSLHHDSQPTSKPHAPSSDPCWSAIHRIRSESPHHLVSLSDLRFSSRIGAGDIGCVYLAEPKCCDEGDTAVFFAAKVMDKNELVSRSKEGRARTEKEILELLDHPFLPTLYACIDSLKWLCLLTEFCPGGDLHVLRQRQPHKRFLEPAVSHERGDPSKSGFIFRGSLKTLRWFYASEVVIAIEYLHMLGIIYRDLKPENVLVRSDGHIMLTDFDLSLKCDESTSAAQIISDENPQATGPQKDNPSHPPRFASSSCIIHNCIVPAVSCFHPKRKRKKKIGQRNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFIFELFYGFTPFRGVDNELTLANIVARALEFPKEPAVPATAKDLISQLLSKDPARRLGSTMGSSAIKHHPFFQGANWALLRCTTPPFIPPHFCKEATSDGSCPETPMDYY* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01300 480 Gene3D Transferase(Phosphotransferase) domain 1 217 266 - -
Pte6g01300 480 PANTHER FLIPPASE KINASE 1-RELATED 20 461 - -
Pte6g01300 480 SMART serkin_6 86 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01300 480 Gene3D Phosphorylase Kinase; domain 1 14 197 - -
Pte6g01300 480 Pfam Protein kinase domain 89 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01300 480 Pfam Protein kinase domain 339 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01300 480 Gene3D Transferase(Phosphotransferase) domain 1 338 460 - -
Pte6g01300 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Pte6g01300 480 MobiDBLite consensus disorder prediction 17 63 - -
Pte6g01300 480 SUPERFAMILY Protein kinase-like (PK-like) 61 466 IPR011009 -
Pte6g01300 480 FunFam serine/threonine-protein kinase D6PK-like 337 460 - -
Pte6g01300 480 ProSiteProfiles Protein kinase domain profile. 86 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01300 480 MobiDBLite consensus disorder prediction 17 61 - -
Pte6g01300 480 FunFam Serine/threonine-protein kinase OXI1 210 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01300 Pte-Chr6 31171972 31174621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01300 4 481 AGC Kinase Gene Family AT3G44610 63.115 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte6g01300 Pkinase 2.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01300 K08286 - cave:132163612 692.575