Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01288 ATGGCGGAAAACCGGAACGGTGATCGTGACGAGGCCAGCGATTACTCATCCGAAGATGAAGGGACTGAGGATTACAGACGAGGAGGCTACCATGCTGTTCGAATTGGAGACAGCTTCAAGAATGGGAGTTATGTCGTCCAGAGAAAGCTCGGGTGGGGGCATTTCTCTACGGTGTGGCTTGCTTGGGACAGACAGAGATCGCGATACGTCGCCCTAAAAATTCAAAAGAGTGCTCAGCATTACACAGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAGATAGCTGAGGGAGACCCAGATGACAGTAAGTGTGTTGTAAAGCTTTTGGACCACTTTAAGCATTCAGGGCCAAACGGGCAACATGTGTGTATGGTATTTGAGTACCTTGGTGATAATCTTCTTACCCTCATTAAGTACAGTGATTACCGTGGGCTTCCTCTTCACAAGGATCACCTGGCATTGATGATGGAGCTTATTGGAATGATGCCACGCAAGATTGCTTTAGGGGGGCGCTATTCCCGGGACTTCTTCAATAGGCATGGTGATCTGAGGCACATCCGCCGGTTACGTTTCTGGCCTCTTAGTAAGGTGCTCATGGAAAAGTATGAATTTAGTGAGCGAGATGCAACTGACATGGCTGACTTCCTTGTCCCCATACTTGATTTTGTACCTGACAATAGGCCAACAGCAGCTCAGAGCCTTAATCATCCCTGGATCACCGCGGGTCCTCGAATTCGTGAGCCTTTGATGACTTGTTTGCAACCAGAATCTGCAGATGGGATCATGACTGAGAAATTGAGGATGGAAAAGGATGAACGGGAGGCAATGGAAGCCGGGGTGGGTAATATGGCGATCGGTTAA 864 0.4815 MAENRNGDRDEASDYSSEDEGTEDYRRGGYHAVRIGDSFKNGSYVVQRKLGWGHFSTVWLAWDRQRSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPDDSKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGLPLHKDHLALMMELIGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPLSKVLMEKYEFSERDATDMADFLVPILDFVPDNRPTAAQSLNHPWITAGPRIREPLMTCLQPESADGIMTEKLRMEKDEREAMEAGVGNMAIG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01288 287 Gene3D Transferase(Phosphotransferase) domain 1 150 240 - -
Pte6g01288 287 Pfam Protein kinase domain 44 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01288 287 SUPERFAMILY Protein kinase-like (PK-like) 148 251 IPR011009 -
Pte6g01288 287 Gene3D Phosphorylase Kinase; domain 1 30 129 - -
Pte6g01288 287 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 12 149 - -
Pte6g01288 287 SMART serkin_6 44 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01288 287 MobiDBLite consensus disorder prediction 1 24 - -
Pte6g01288 287 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Pte6g01288 287 FunFam CMGC/SRPK protein kinase 30 129 - -
Pte6g01288 287 SUPERFAMILY Protein kinase-like (PK-like) 40 148 IPR011009 -
Pte6g01288 287 ProSiteProfiles Protein kinase domain profile. 44 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01288 287 Gene3D Transferase(Phosphotransferase) domain 1 98 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01288 Pte-Chr6 31036156 31040369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01288 123 286 EF-hand Containing Proteins AT5G22840 56.287 1.68e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pte6g01288 Pkinase 4.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01288 K08832 - tcc:18590429 295.434