Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01258 ATGTCGCTAGATCGACATGTGTTATCTGTTATATTTGAAGCTGTCAGTTACGGACTAATAACCATGAAATCCACAACAGCTTTAACTTTTGGTTTGCTACTGCATATAATGTCATTGACACAGTTCTTCCTTGAAGGCTACATTAAGGATTTTCAGGTTTATAATCCTCACAGAGTTGGTAAGATAACAGTAGAGCTGCAAGGAAGGATTAACGATTGTCGGGCCCTCACATACCGACAAGACATAAAGGCTAGGGAAATAGAAGATTATAAAATCCGTGCACTTCCTACACGTCAGTGGGGCTATATTGTGATCACTACCCCTGAAGGCGTTTTGGATCATGAAGAGGCTATTAGAAGAAATGTAGGCGGTCAGGTTCTAGGTTATTTTAATTAG 396 0.399 MSLDRHVLSVIFEAVSYGLITMKSTTALTFGLLLHIMSLTQFFLEGYIKDFQVYNPHRVGKITVELQGRINDCRALTYRQDIKAREIEDYKIRALPTRQWGYIVITTPEGVLDHEEAIRRNVGGQVLGYFN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01258 131 ProSitePatterns Ribosomal protein S8 signature. 101 118 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pte6g01258 131 Gene3D - 31 70 - -
Pte6g01258 131 PANTHER 40S RIBOSOMAL PROTEIN S15A 38 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pte6g01258 131 SUPERFAMILY Ribosomal protein S8 35 130 IPR035987 GO:0003735|GO:0005840|GO:0006412
Pte6g01258 131 Gene3D - 71 130 - -
Pte6g01258 131 Pfam Ribosomal protein S8 44 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01258 Pte-Chr6 30783174 30788646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01258 45 130 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 77.907 1.33e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01258 K02957 - zju:107419531 164.466