Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01238 ATGCTTGAACAGATAGCTGAAATCCTGAAAGATCGTCCATCTTGGTTCCGGGACTGTCGGAGCCTTGAGATTTTCACAATGTTCCCTGCTGGAAATGGAGGGACAATTGAACTTGTTTATATGCAAACATATGCTCCAACAACTTTGGCTCCTGCACGGGATTTCTGGACACTAAGATATACTACAACTTTAGACAATGGAAGCTTGGTTGTGTGTGAGAGATCACTGTCTGGTTCTGGTGCCGGGCCAAGTGGAACTTCTGCTGTGCAGTTTGTTAGAGCAGAAATGCTTCCTAGTGGCTATTTAATTCGTCCATGTGAGGGTGGAGGATCAATTATCCACATTGTTGACCACTTGAATCATGAGGCCTGGAGTGTGCCTGAGGTGCTGCGACCACTTTATGAATCTTCTAAAGTGGTAGCCCAGAGGATGACTATTGCAGCATTGCGCTATGTAAGACAAATAGCACAAGAGACAAGTGGTGAGGTTGTATACAGTTTAGGTAGACAACCCGCTGTACTGCGAACTTTTAGCCAAAGATTGAGCAGAGGCTTTAATGATGCAGTAAATGGATTCACTGATGATGGTTGGTCTGTGCTAAGTAGTGGCGGTGCTGAAGATGTGATTATTGCTGTTAATTCCATAAAAAATTTGAGCAATACAACTAGCCCAGCAAATTCTCTTGCGTTTCTTGGAGGCATTCTATGTGCTAAGGCTTCCATGTTGCTGCAAAATGTTCCACCTGCTGTTTTAGTGCGCTTTCTTAGGGAGCACCGTTCGGAGTGGGCTGATTTTAATGTAGATGCGTATGCAGCAGCATCGTTGAAACCTGGATCCTATGCTTATCCAGAAATGAGGCCAACAAGATTTACTGGAAGTCAAGTTATCATGCCTCTTGGCCATACTGTAGAACATGAGGAGATGCTTGAAGTTATACGGTTGGAAGGCCACTCTCTTGCTGAAGATGATGCCTTTGTATCAAGGGATATCCACCTCTTGCAGATATGTGGTGGAGTGGACGAGAATGCAGTGGGTGCCTGTTCTGAACTTATTTTTGCTCCTATTGACGAGATGTTTCCTGATGATGCTCTGTTGGTTCCTTCAGGTTTCCGCATTATACCATTGGATTCAAGATCAGGTGATTCAAAAGATCCCTCATCTAACCGAACACTGGACTTGACATCTGGGCTCGAAATGGCAGCAAACAATGCGGCTGCTGATATGTCTTTAAGTCATAACAATCGATCTGTGCTGACAATTGCTTTCCAATTCCCTTTTGACATAAGTCTGCGGGATAATGTTGCAATCATGGCACGTCAGTATGTACGTAGTATGATTTCCTCTGTTCAAAGGGTTGCCTTGGCCATATCGCCAACTGGTATTAGACCAGCCGCAGGTCCAAGGCTATCTCCGGGCTCGCCAGAGGCTATTACATTAGCAAACTGGATTAGCCAAAGCTACAGCTTCTACATTGGAAGTGATTTGCTGAGATGTGACCCTGTGGGCAGTGATTCAGTTTTGAAACAATTATGGCATCATCCTGATGCGATATTGTGCTGTTCAGTGAAGTCTCTACCAGTATTTATGTTTGCAAACCAAGCTGGATTCGACATGCTAGAAACAAGTATAGTCGCTCTTCAAGACATCACATTGGACAAGATATTTGATGAGTCTGGACGCAAGACACTGTTTGCGGAATTCGCCAAATTAATGCAGCAGGGTTTTGCTTATTTCCCAGCTGGAATATGTATGTCTACAATGGGACGCCATATTTCGTACGAACAAGCCATTGCATGGAAAGTACTAGCTACTGATGAGAGTACTGTTCATTGCTTGGCTTTTTCTTTCATAAATTGGTCGTTTGTATGA 1869 0.4398 MLEQIAEILKDRPSWFRDCRSLEIFTMFPAGNGGTIELVYMQTYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGAGPSGTSAVQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNHEAWSVPEVLRPLYESSKVVAQRMTIAALRYVRQIAQETSGEVVYSLGRQPAVLRTFSQRLSRGFNDAVNGFTDDGWSVLSSGGAEDVIIAVNSIKNLSNTTSPANSLAFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYAAASLKPGSYAYPEMRPTRFTGSQVIMPLGHTVEHEEMLEVIRLEGHSLAEDDAFVSRDIHLLQICGGVDENAVGACSELIFAPIDEMFPDDALLVPSGFRIIPLDSRSGDSKDPSSNRTLDLTSGLEMAANNAAADMSLSHNNRSVLTIAFQFPFDISLRDNVAIMARQYVRSMISSVQRVALAISPTGIRPAAGPRLSPGSPEAITLANWISQSYSFYIGSDLLRCDPVGSDSVLKQLWHHPDAILCCSVKSLPVFMFANQAGFDMLETSIVALQDITLDKIFDESGRKTLFAEFAKLMQQGFAYFPAGICMSTMGRHISYEQAIAWKVLATDESTVHCLAFSFINWSFV* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01238 622 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 3 622 IPR044830 GO:0003700
Pte6g01238 622 Pfam START domain 5 154 IPR002913 GO:0008289
Pte6g01238 622 Pfam MEKHLA domain 478 621 IPR013978 -
Pte6g01238 622 SMART START_1 1 155 IPR002913 GO:0008289
Pte6g01238 622 Gene3D - 2 161 IPR023393 -
Pte6g01238 622 SUPERFAMILY Bet v1-like 3 157 - -
Pte6g01238 622 ProSiteProfiles START domain profile. 1 164 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01238 Pte-Chr6 30580481 30584516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01238 4 623 Homeobox Transcription Factor Family AT5G60690 77.229 0.0 1018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01238 K09338 - qsa:O6P43_000330 1060.83