Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01233 ATGATTGCGCAGATAGCCCGTCGCATCTGCCGATGCGGACTTGCCAAAGCTTTCCAGAGGGCATACTACGACAGGTCTTGGCACCGCTCCCAATTGGGTTTACTGTCTTCATGGTTAACTTGGCTACCATCTGAATTTACAAGCACGAGTATCAACCCAGCAAGAAGTTTTGGAGCTGCTGTTATTTTCAACAGCGAAAAAGTTTGGGATGACCAGTGGATTTTCTGGGTTGGACGTTTCATTGGGGCTGCCATTGCTGCATTCTACCACCAATACATTCTTAGAGCTGCTGCTATCAAAGCTCTAGGATCCTTCAGGAGCAACGCTTGA 330 0.4788 MIAQIARRICRCGLAKAFQRAYYDRSWHRSQLGLLSSWLTWLPSEFTSTSINPARSFGAAVIFNSEKVWDDQWIFWVGRFIGAAIAAFYHQYILRAAAIKALGSFRSNA* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01233 109 Pfam Major intrinsic protein 39 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01233 109 SUPERFAMILY Aquaporin-like 25 94 IPR023271 -
Pte6g01233 109 Gene3D Glycerol uptake facilitator protein. 2 109 IPR023271 -
Pte6g01233 109 PRINTS Major intrinsic protein family signature 33 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01233 109 PRINTS Major intrinsic protein family signature 73 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g01233 109 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 46 100 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01233 Pte-Chr6 30553981 30554685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01233 1 107 Major Intrinsic Protein MIP AT5G60660 45.161 1.39e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01233 K09872 - rcu:8264070 127.872