Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01225 ATGTTCTCGATTCGTTTGCACTTCCGTAATGTTTTGTATGTTTTTCTGTCCTCCGAATCAAGTTCTTGCTTTTCCTTTGACAGCATTACAATTATGTTTTTCGCAAAGGAAAGCAGATATGGGAACCTGATTGCAACTGAAGAATTTTCCCTTAAACAAAGCACAATACATTTCCAAAAAGGCCTAAGCCAGATGTTTAGACAGTCATCTGGATCTGGAATTGATCTCTCATATTATGACGAGACAGAACTGACGAAAGAGGGTTGTATAGAAGTTTATCCTCTTGCAGTGAAGGCTCAAACATATTGTTTAGACCACCAGGAACCTGTCGGGACCACGACTCGTACTTGTGAGATCATTCTTTCAAGCTTGACCAGATGTGAGAAGGGTGAATACAAAGTTCAAATTATTAAACAAATCCTTTGGGTGGATGGAATCCGGTTTGAGCTTCAGGAGAGATATGGAATTGAAAACCCTGGGAAGGTTTACTTCGATGCTGGTGATTTTGAAAGAAAATGTGTTGTTTCCTTGTCAGAACCTCCAGACACAACTATCCTCCCTTGCCAACATATGGTATGTAAGGGCTGTGACAGTACTTAA 600 0.4017 MFSIRLHFRNVLYVFLSSESSSCFSFDSITIMFFAKESRYGNLIATEEFSLKQSTIHFQKGLSQMFRQSSGSGIDLSYYDETELTKEGCIEVYPLAVKAQTYCLDHQEPVGTTTRTCEIILSSLTRCEKGEYKVQIIKQILWVDGIRFELQERYGIENPGKVYFDAGDFERKCVVSLSEPPDTTILPCQHMVCKGCDST* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01225 199 PANTHER MAHOGUNIN 25 196 IPR045194 GO:0061630
Pte6g01225 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 166 199 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01225 Pte-Chr6 30451638 30452300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01225 24 194 C3H Transcription Factor Family AT3G09770 42.487 3.53e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01225 - - qsa:O6P43_028360 189.504