Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01219 ATGAAGAGAGAAAGAAAGATAGAACAAAGTGTCATAATTGGAAACTGTCTGAAGTTTCTTCCTCAAAGAACCAAATTAGAAGAATTCTCATATTATAGTCCATCTAGTATCGAACGTGTGTTTGAGTGCAAGACATGTAACAAGCACTCCCCTTCATTTCAAGCACTTGGAGGTCATAGGGCTAGCCACAAGAAACCTAAGTTTGTGGATGGAAACGTTGAGATGATCCAGATGAATGCATCAACGATCCAGATGTAA 258 0.3876 MKRERKIEQSVIIGNCLKFLPQRTKLEEFSYYSPSSIERVFECKTCNKHSPSFQALGGHRASHKKPKFVDGNVEMIQMNASTIQM* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01219 85 PANTHER ZINC FINGER PROTEIN ZAT5 36 71 - -
Pte6g01219 85 SUPERFAMILY beta-beta-alpha zinc fingers 38 67 IPR036236 -
Pte6g01219 85 Pfam C2H2-type zinc finger 40 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01219 Pte-Chr6 30415722 30415979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01219 1 69 C2H2 Transcription Factor Family AT2G37430 49.333 9.58e-15 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01219 - - qsu:112016444 86.6557