Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01205 ATGGAGCACTGCAGTGACACAAACACCAACTTTTCTCGATCTTCTCCCTATTCTTCTTCTCCGCCACCATCAACTGATCATCAAGCTCCTCATGCTCCACATGTTATTATGAGCCCTTGTGCTGCTTGTAAGATTTTGAGGCGGAGATGTGCTGACAAATGTGTGCTGGCACCCTATTTCCCTCCCACAGATCCGGCCAAGTTTACCGTTGCTCACAGAGTTTTCGGGGCCAGCAACATCATCAAGTTTTTACAGGAACTTCCCGAATATCAAAGAGCTGATGCAGTGAGCAGCATGGTTTATGAGGCCAGTGCAAGGATAAGAGACCCAGTTTATGGGTGTGCAGGTGCAATTTGTCAGCTCCAGAATCAAGTGAATGAGCTCCAAGCACAATTAGCAAAGGCACGAGCAGAGGTTGTCAACATGCAATTACAGCATGCCAACCTTGTTGCTCTCATTTGCATGGAAATGGGACAAACTCATCATCATCAAGAAGCACCACAAGATCAGCAGCTGTTACTCGAAAGTTTTTATTTATCAAGTCCACCCCCAAGCTACCAGAGGAATCTACACTTCTTTGATGACAATAACAACAACCTAAATGCACTGTGGGAGCCATTATGGACATGA 630 0.4571 MEHCSDTNTNFSRSSPYSSSPPPSTDHQAPHAPHVIMSPCAACKILRRRCADKCVLAPYFPPTDPAKFTVAHRVFGASNIIKFLQELPEYQRADAVSSMVYEASARIRDPVYGCAGAICQLQNQVNELQAQLAKARAEVVNMQLQHANLVALICMEMGQTHHHQEAPQDQQLLLESFYLSSPPPSYQRNLHFFDDNNNNLNALWEPLWT* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01205 209 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 162 - -
Pte6g01205 209 MobiDBLite consensus disorder prediction 1 31 - -
Pte6g01205 209 ProSiteProfiles LOB domain profile. 38 139 IPR004883 -
Pte6g01205 209 MobiDBLite consensus disorder prediction 1 25 - -
Pte6g01205 209 Pfam Lateral organ boundaries (LOB) domain 39 136 IPR004883 -
Pte6g01205 209 Coils Coil 118 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01205 Pte-Chr6 30290981 30292476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01205 35 210 AS2 family AT2G28500 65.217 1.39e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte6g01205 LOB 4.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01205 - - gmx:100819336 276.559