Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01200 ATGGTTGCCATCAAGAAGATAGCAAACGCTTTTGATAACGACATGGATGCCAAGTGCACTCTTCGTGAGATTAAGCTTCTTCGCCATTTGGATCATGAAAATGTGACTGCTATAAGAGATGTGATTCCTCCACCATCAAGGAATCAGTTTAATGATGTTTACTTAACTACAGAACTCATGGATACTGATCTTCATCAAATCATAAGGTCCAATCAAAATTTGTCTAAGGAGCACTGTCAGTACTTTTTGTACCAGCTTCTTCGCGGATTGAAGTACATACATTCTGCAAATATAATCCATAGGGATTTGAAACCCAGCAATCTTTTGCTTAATGCAAACTGCGATCTGAAGATTGGTGATTTTGGACTTGCTCGCCACACTTTAGAAAATGACCTCATGACAGAATATGTAGTTACCAGATGGTATAGGGCTCTTGAGTTGTTGTTGAATTCCTCTGATTACACTTTTGTTATAGATGTGTGGTCTGTAGGTTGCATATTCATGGAGCTCATGAACAGAAAGCCCTTGTTTCCAGGCAAAGACCAACTGATTCTTGTGTTTCAACTTCTTGGTACACCAAGTGAGCCTGATCTTGGATTTGCTAGAAGTGAGGAAGCAAGAAAATACATCCGCCAACTGCCTCAATATCCTTGCCAACCTCTAGCTAAGGTTTTCCCACATGTTCACCCGTTAGCTATTGGTCTCATATACAGAATGTTGACATTTGATCCCGCAAAAAGAATCACGGTTGAAGAGGCCTTATCACACTCTTACCTTGCAAAGCTACATGACGTAGCTGATGAACCAGTGTGTCTAGTGCAGTTCTCGTTTGATTTTAAGCAACAACCCATGAATGAAGAGCAGATGAAAGATATGATTTATGTGGAGGCATTAACACTCAATCCCGAGTATTCTTAA 918 0.402 MVAIKKIANAFDNDMDAKCTLREIKLLRHLDHENVTAIRDVIPPPSRNQFNDVYLTTELMDTDLHQIIRSNQNLSKEHCQYFLYQLLRGLKYIHSANIIHRDLKPSNLLLNANCDLKIGDFGLARHTLENDLMTEYVVTRWYRALELLLNSSDYTFVIDVWSVGCIFMELMNRKPLFPGKDQLILVFQLLGTPSEPDLGFARSEEARKYIRQLPQYPCQPLAKVFPHVHPLAIGLIYRMLTFDPAKRITVEEALSHSYLAKLHDVADEPVCLVQFSFDFKQQPMNEEQMKDMIYVEALTLNPEYS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01200 305 FunFam Mitogen-activated protein kinase 1 70 - -
Pte6g01200 305 SMART serkin_6 1 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01200 305 Gene3D Phosphorylase Kinase; domain 1 2 295 - -
Pte6g01200 305 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 261 - -
Pte6g01200 305 Pfam Protein kinase domain 2 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01200 305 SUPERFAMILY Protein kinase-like (PK-like) 1 267 IPR011009 -
Pte6g01200 305 Gene3D Transferase(Phosphotransferase) domain 1 60 286 - -
Pte6g01200 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 98 110 IPR008271 GO:0004672|GO:0006468
Pte6g01200 305 ProSitePatterns MAP kinase signature. 11 114 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pte6g01200 305 FunFam Mitogen-activated protein kinase 60 286 - -
Pte6g01200 305 ProSiteProfiles Protein kinase domain profile. 1 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01200 Pte-Chr6 30200102 30201944 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01200 1 306 MAP Kinase Gene Family AT3G45640 77.670 1.74e-179 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pte6g01200 Pkinase 2.2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01200 K20536 - zju:107411280 506.523