Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01190 ATGGAGTCGGATAAACCATCGAAGTCACCACCACCACTGGTTCCTCCATTTCCAAGAGACCACCGCGGCTCACTCGAAGTATTCAATCCCTCATCCTTCTCAACCGCCAGGCTAACTAACCCGCCCTTCCGCACTCAGCAAAGCTGGTTAGAGCAACTTGGAAGCTCTGATCCGGCTGACGTACCAAAGCTCTCTACTTCCAACTCGACCGGAGCTACTGAAGCCGCCACCTACTCATGGATGGCATTCCAGGAACCAACCCCACCGACACAAGAAACCCAGATGACAATTTCGGCCATTCTCAGGGACAAAGGGACAATCACGTCATCGCAGCCTTCCGATGCAGTCGGCGCTTCTGCACAGAGAGCAGCGGAGTGGGGCTTAGTGCTGAAGACGGACACTCAAACAGGGAAACCCCAAGGAGTAACGGTTCGGAACTCTGGTGGGGATAACCAGGATCCGAATAGCAAACCGGCTGAGAACTCCAGAAAGAACTCAACCACATCGGTTAGAAGCTCAGAAGATACGGGAGACGATGTGGGAAAAGACGCACGAGGGATTCCGAGGATTTCGGAGGACTTGAGAGATGCCCTGTCGACGTTTCAGCAGACTTTTGTCGTGGCGGACGCTACCAAACCCGATTACCCGATTATGTATGCCAGTGCTGGGTTTTTCAAGATGACGGGTTATACATCCAAGGAGGTCATAGGAAGAAACTGCCGTTTTCTACAGGGAGCGGGAACAGATGCAGAGTCTGTGGCAAAGATAAGAGAAGCGTTAGAGGCAGGGTCGAGTTACTGTGGGAGGATACTCAATTATAAGAAAGATGGAAGTCCTTTTTGGAACCTTCTTACTATTTCACCCATCAAGGATGACAATGGAAGAGTACTCAAATTTATTGGAATGCTAATGGAGGTTAGCAAGCATACTGAAGGCTCCAAGGATAAGATGCTACGTCCCAATGGATTGCCCGAGTCTTTGATTCGATACGATGCTCGCCAGAAAGATAAAGCAGTGAATTCAGTGTCTGAACTAGTTGAGGCAGTGAAGAGACCCCGGGCACTCAGTGAATCGACAAATCGCCCATTTAGAAAATCAGGAGGTGGAGGGGAAGAAGATAGAGGAGAAACTATAACAAGGAGAAATTCAGAGAGTGTGGCTCCTCATAGACGTAACTCACGTGGAGACGCTAGAACTTCCATGGAGAAAATCATCGAGGTCCCTGAAAAGAAACCGAAGAAATCTGCTCGCCGCTCTTTCATGGGAATCATCAGAAAAAGTCAGGCCAATAATGAAAACGTTGAGAATGAAGTTGATATTGGTGATTATGAGAGTGAGGAGGATGAAAGGCCTGATAGTGTTGATGACAAAGTAAGGCAGAGGGAAATGAGGAAGGGTATTGATCTTGCCACCACACTTGAACGCATAGAGAAGAACTTCGTCATCACAGATCCAAGGCTACCTGATAATCCCATTATTTTTGCATCTGATAGCTTCCTCGAGCTTACGGAATACAGTCGTGAAGAAATCCTAGGAAGAAATTGCAGGTTTCTACAAGGACCTGAAACTGACCCAGCTACTGTAAGGAAGATAAGAGAGGCAATTGACAACCAAACTGAAGTAACAGTACAGCTTATCAACTACACAAAGAGTGGAAAAAAGTTTTGGAACTTATTTCATCTTCAACCTATGCGTGATCAGAAGGGAGAAGTGCAGTATTTTATTGGAGTACAACTAGATGGCAGTCAGCAAGTGGAGCCTCTTCATAATTGTATTCCTAAAGATACAGCCTTGGAGGGTGAAAAGCTGGTGAAACAAACTGCTGAAAATGTTGATGTGGCAGTGAGGGAACTTCCAGATGCCAATTTGACACCCGAAGATTTATGGGCTAATCATTCAAAGGTGGTTCTACCAAAACCTCACAGAAAAAATGACTCCTCCTGGACAGCTATCCAGAAGATTCTGGACAGAGGAGAAAAGATAGGATTAAAGCATTTTAGGCCAATTAAACCCTTAGGATCTGGTGACACTGGCAGTGTACACCTAGTGGAACTCTGTGAAACAGGTCAGCATTTTGCCATGAAAGCCATGGATAAGGGTATCATGCTCAACAGAAATAAGGTACATAGAGCTTGTACTGAAAGAGAAATCCTTGATATGTTGGATCACCCTTTCCTGCCAGCATTATATGCTTCATTTCAGACTTCAACACATGTTTGTCTGGTAACTGATTACTGTTCTGGTGGAGAGCTCTTCCTTCTGTTGGATAAACAACCCACAAAGGTCCTGAAGGAAGATGCTGTAAGATTTTATGCTGCGGAGGTAGTTGTTGCTTTGGAGTACCTTCACTGTCAAGGAATAATATACAGGGATTTGAAACCTGAAAATGTCTTGCTGCAGACGAGTGGACACGTATCTTTGACAGATTTTGATTTGTCGTGCTTAACATATTGCAAACCCCAGCTTTTGATTCCAAATAATAACGAAAAGAAAAAACAACAGAAAATGAAGAGTCAACAGACTCCAATATTTATGGCTGAACCAATGAGAGCTTCAAATTCTTTTGTAGGCACAGAAGAGTACATAGCTCCGGAAATTATTACTGGTTCAGGTCATACAAGTGCGGTAGATTGGTGGGCTCTTGGAATTCTTCTGTATGAAATGCTGTATGGGCATACTCCATTTCGAGGAAAGACGAGGCAGAAGACTTTTGCCAACATTCTTCATAAGGATCTTAAATTTCCAGGGAGTATACCCGTTAGCCTCCAGGCAAAGCAGCTAATGTACAGGTTGCTGCACAGAGATCCCAAAAATAGACTGTGTTCAAGTGAAGGAGCAAGTGAAATCAAACAGCATCCATTCTTTCGTGGTGTCAATTGGGCCCTTGTTCGTTGCATGAAACCTCCTGAGCTCGACGTTCCTCCTGGGATAGTAAATGTTGAGAATGGAGCTAAGGAAGTGCCGCCAGAACTAGAAGATCTGCAGACGAATATTTTCTAG 3000 0.4503 MESDKPSKSPPPLVPPFPRDHRGSLEVFNPSSFSTARLTNPPFRTQQSWLEQLGSSDPADVPKLSTSNSTGATEAATYSWMAFQEPTPPTQETQMTISAILRDKGTITSSQPSDAVGASAQRAAEWGLVLKTDTQTGKPQGVTVRNSGGDNQDPNSKPAENSRKNSTTSVRSSEDTGDDVGKDARGIPRISEDLRDALSTFQQTFVVADATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGAGTDAESVAKIREALEAGSSYCGRILNYKKDGSPFWNLLTISPIKDDNGRVLKFIGMLMEVSKHTEGSKDKMLRPNGLPESLIRYDARQKDKAVNSVSELVEAVKRPRALSESTNRPFRKSGGGGEEDRGETITRRNSESVAPHRRNSRGDARTSMEKIIEVPEKKPKKSARRSFMGIIRKSQANNENVENEVDIGDYESEEDERPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQQVEPLHNCIPKDTALEGEKLVKQTAENVDVAVRELPDANLTPEDLWANHSKVVLPKPHRKNDSSWTAIQKILDRGEKIGLKHFRPIKPLGSGDTGSVHLVELCETGQHFAMKAMDKGIMLNRNKVHRACTEREILDMLDHPFLPALYASFQTSTHVCLVTDYCSGGELFLLLDKQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQTSGHVSLTDFDLSCLTYCKPQLLIPNNNEKKKQQKMKSQQTPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMLYGHTPFRGKTRQKTFANILHKDLKFPGSIPVSLQAKQLMYRLLHRDPKNRLCSSEGASEIKQHPFFRGVNWALVRCMKPPELDVPPGIVNVENGAKEVPPELEDLQTNIF* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01190 999 SMART serkin_6 666 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01190 999 ProSitePatterns Protein kinases ATP-binding region signature. 672 695 IPR017441 GO:0005524
Pte6g01190 999 Pfam Protein kinase domain 668 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01190 999 SMART pas_2 467 536 IPR000014 -
Pte6g01190 999 SMART pas_2 192 261 IPR000014 -
Pte6g01190 999 SUPERFAMILY PYP-like sensor domain (PAS domain) 481 580 IPR035965 -
Pte6g01190 999 MobiDBLite consensus disorder prediction 133 174 - -
Pte6g01190 999 SUPERFAMILY Protein kinase-like (PK-like) 644 976 IPR011009 -
Pte6g01190 999 FunFam LOV domain-containing protein 665 749 - -
Pte6g01190 999 MobiDBLite consensus disorder prediction 1 73 - -
Pte6g01190 999 CDD PAS 217 306 IPR000014 -
Pte6g01190 999 SMART pac_2 267 309 IPR001610 -
Pte6g01190 999 SMART pac_2 542 584 IPR001610 -
Pte6g01190 999 ProSiteProfiles PAS repeat profile. 469 538 IPR000014 -
Pte6g01190 999 SUPERFAMILY PYP-like sensor domain (PAS domain) 211 303 IPR035965 -
Pte6g01190 999 ProSiteProfiles Protein kinase domain profile. 666 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01190 999 MobiDBLite consensus disorder prediction 366 416 - -
Pte6g01190 999 ProSiteProfiles PAC domain profile. 264 318 IPR000700 -
Pte6g01190 999 FunFam Putative LOV domain-containing protein 204 360 - -
Pte6g01190 999 ProSiteProfiles PAC domain profile. 539 593 IPR000700 -
Pte6g01190 999 Gene3D PAS domain 453 618 - -
Pte6g01190 999 MobiDBLite consensus disorder prediction 437 451 - -
Pte6g01190 999 FunFam Putative LOV domain-containing protein 750 967 - -
Pte6g01190 999 ProSiteProfiles PAS repeat profile. 190 239 IPR000014 -
Pte6g01190 999 Gene3D Phosphorylase Kinase; domain 1 665 749 - -
Pte6g01190 999 CDD PAS 480 580 IPR000014 -
Pte6g01190 999 Gene3D PAS domain 204 361 - -
Pte6g01190 999 NCBIfam PAS domain S-box protein 490 580 IPR000014 -
Pte6g01190 999 NCBIfam PAS domain S-box protein 214 310 IPR000014 -
Pte6g01190 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Pte6g01190 999 FunFam LOV domain-containing protein 454 618 - -
Pte6g01190 999 PANTHER FLIPPASE KINASE 1-RELATED 159 972 - -
Pte6g01190 999 CDD STKc_phototropin_like 664 979 - -
Pte6g01190 999 MobiDBLite consensus disorder prediction 131 186 - -
Pte6g01190 999 Gene3D Transferase(Phosphotransferase) domain 1 750 965 - -
Pte6g01190 999 MobiDBLite consensus disorder prediction 27 73 - -
Pte6g01190 999 Pfam PAS domain 488 580 IPR000014 -
Pte6g01190 999 Pfam PAS domain 211 307 IPR000014 -
Pte6g01190 999 MobiDBLite consensus disorder prediction 351 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01190 Pte-Chr6 30110810 30119771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01190 3 1000 AGC Kinase Gene Family AT3G45780 70.553 0.0 1386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pte6g01190 Pkinase 3.7e-63 CL0016