Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01188 ATGGACAGACAAATGATTAACACTTTCTCATCTGCCTCCGACTCCCCATTAGGCCAGACGTCTTCAGGTGCTCACATGCAACAGCTGTTTTCTACCGGTAACTCTTTTCCGTTAAGGAACATCGCCGTCTCTGTAACTGACCAACTGGAGTTGGACTCACTGGGCGAGACTCTGAGGTTACCCAGCTCAGATATCAGCACCAACAACTGCTATGACAGTGGTAGTGGTACTAGCGGCTATGGTTCACCGACCTCATCACTCCTCAGCTATGGAAGCAATACCAGTTTTTCTACTACCGTTACTGCTACGAAGCCGACCATTCATCCACAGCCTAGTTGTCGTCTAATACAGACGAGAACCAGCAGCCATTTGCTTCAGAATAAAATCTCCATTGGCATCCCCCATCCCTTTTCAAATCTGTTCTCCGAATTGATCGACTCTGAAACAGGACCTCTACGCAGAGTTTGCAGCAAAGGAGACTTGCATTGGATGCCATATAGCCATCGGTCAGATAGCCCCCTCCGGAGGCAGAGTTCTGGGATCATTATTGAAGATATGCACAGAGCTTACCGTTATGGTCCTGAAGAAAAGAAACAGCGTGTTGAAAGGTATAGAAGTAAAAGAAGTCTTCGGAACTTCAACAGGGAGATTAAGTATAATTGCAGGAAGACATTGGCGGACAGTCGACCTCGAATCAGGGGACGTTTTGCTAGGAATGATGGGATTGATGAAATGAAAGCTCCTGTTGAATGGAGACGCGCAAATGGAGAAGATGAAGTTGATTGGATGACTCTTCTTGATACGTTTTCTGGAAATACTGTTCAGTGA 828 0.4626 MDRQMINTFSSASDSPLGQTSSGAHMQQLFSTGNSFPLRNIAVSVTDQLELDSLGETLRLPSSDISTNNCYDSGSGTSGYGSPTSSLLSYGSNTSFSTTVTATKPTIHPQPSCRLIQTRTSSHLLQNKISIGIPHPFSNLFSELIDSETGPLRRVCSKGDLHWMPYSHRSDSPLRRQSSGIIIEDMHRAYRYGPEEKKQRVERYRSKRSLRNFNREIKYNCRKTLADSRPRIRGRFARNDGIDEMKAPVEWRRANGEDEVDWMTLLDTFSGNTVQ* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01188 275 ProSiteProfiles CCT domain profile. 197 239 IPR010402 GO:0005515
Pte6g01188 275 MobiDBLite consensus disorder prediction 1 23 - -
Pte6g01188 275 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 88 247 IPR045281 GO:0009909
Pte6g01188 275 Pfam CCT motif 198 239 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01188 Pte-Chr6 30077627 30081977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01188 157 244 C2C2-CO-like Transcription Factor Family AT5G15850 37.363 2.87e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte6g01188 CCT 5.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01188 - - zju:107407389 172.17