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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pte6g01180
ATGTCGCCAGCAAAAGTTGATGGTTCAAAAAAAGCTGACCCCAAGGCCCAAGCCTTGAAAGCTGCAAAGGCTATCAAATCTGGCTCTGTTGCCAAGAAGAAGGTTAAGAAAATGCGTACATCTGTCACGTTCCATCGTCCAAGAACATTGAAGAAGGAAAGAAATCCTAAATATCCTCGAATCAGTGCTCCTCCAAGGAACAAGCTTGACCATTATCAGATTCTCAAGTATCCACTGACCACGGAGTCTGCGATGAAGAAAATTGAAGATAATAACACTTTGGTCTTCATTGTTGACTTGCGTGCTGATAAGAAGAAGATCAAGGATGCTGTTAAAAAGATGTATGATATCCAAGCCAAGAAAGTTAACACCTTGATCAGGCCTGATGGTACCAAGAAGGCTTATGTGAGATTGGCACCAGATTATGATGCTCTCGACGTTGCAAACAAAATTGGGATAATCTAA
465
0.4151
MSPAKVDGSKKADPKAQALKAAKAIKSGSVAKKKVKKMRTSVTFHRPRTLKKERNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLAPDYDALDVANKIGII*
155
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pte6g01180
154
SUPERFAMILY
Ribosomal proteins S24e, L23 and L15e
71
147
IPR012678
GO:0003735|GO:0005840|GO:0006412
Pte6g01180
154
PANTHER
60S RIBOSOMAL PROTEIN L23A
7
154
IPR013025
GO:0003735|GO:0005840|GO:0006412
Pte6g01180
154
Gene3D
-
35
154
IPR012677
-
Pte6g01180
154
MobiDBLite
consensus disorder prediction
1
65
-
-
Pte6g01180
154
ProSitePatterns
Ribosomal protein L23 signature.
132
147
IPR001014
GO:0019843
Pte6g01180
154
NCBIfam
50S ribosomal protein L23
78
154
IPR019985
GO:0003735|GO:0005840|GO:0006412
Pte6g01180
154
MobiDBLite
consensus disorder prediction
27
45
-
-
Pte6g01180
154
Pfam
Ribosomal protein L23
74
137
IPR013025
GO:0003735|GO:0005840|GO:0006412
Pte6g01180
154
FunFam
60S ribosomal protein L23a
33
154
-
-
Pte6g01180
154
Pfam
Ribosomal protein L23, N-terminal domain
15
64
IPR005633
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pte6g01180
Pte-Chr6
30003892
30005835
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pte6g01180
1
155
Cytoplasmic Ribosomal Protein Gene Family
AT2G39460
87.097
2.27e-69
205
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pte6g01180
K02893
-
qsa:O6P43_031159
245.358
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