Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01178 ATGACCCCTCAAGAAGAGCGTCTGGTGCTTGAACTTCACTCCAAGTGGGGAAATAGATGGTCCAAAATTGCTCGCAAATTACCTGGGCGCACAGACAATGAGATCAAGAATTACTGGAGAACTTACATGAGAAAAGAGGCTCAAAAGAAGAAACGAGCTTCATCTCCCAAATCAGCCTCTTCTAATTGTTATTCCTCATCATCAAATGACCAAATGGTAGATGTTTTTCTTTCCTCAGAGACTGGAATTGAGAGTTTTTATGATACTGGTGGAGCAACTGTCAAAGCGTTAGACGACAAGAAAAAGGACAAAGATAAGGAACAAGAGGGTAATCAGCAAGGGTGCTCCATGGATGATATATGGAAAGATATCACTATGTCAGATGTCGATTTTCTGCAACCAGTTTGTGATAGTCACAGTGAAGAAGGCTGCAATTTCTCTTGTCCACCAATCACTTCTCCATCATGGGAGTATTCTGCAGAATCTCTGTGGATGATGGATGAAGAAGAAAGTAAGATGTTTTTCCCTATACCAAGTGACCAACTTCTGTCCTGTTATGAATTTGGAGACTACCTATTAACAGTTTAA 588 0.4065 MTPQEERLVLELHSKWGNRWSKIARKLPGRTDNEIKNYWRTYMRKEAQKKKRASSPKSASSNCYSSSSNDQMVDVFLSSETGIESFYDTGGATVKALDDKKKDKDKEQEGNQQGCSMDDIWKDITMSDVDFLQPVCDSHSEEGCNFSCPPITSPSWEYSAESLWMMDEEESKMFFPIPSDQLLSCYEFGDYLLTV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01178 195 FunFam MYB transcription factor 1 66 - -
Pte6g01178 195 MobiDBLite consensus disorder prediction 46 68 - -
Pte6g01178 195 CDD SANT 1 43 IPR001005 -
Pte6g01178 195 SMART sant 1 45 IPR001005 -
Pte6g01178 195 Pfam Myb-like DNA-binding domain 2 42 IPR001005 -
Pte6g01178 195 Gene3D - 2 71 - -
Pte6g01178 195 ProSiteProfiles Myb-like domain profile. 1 43 IPR001005 -
Pte6g01178 195 SUPERFAMILY Homeodomain-like 2 49 IPR009057 -
Pte6g01178 195 MobiDBLite consensus disorder prediction 54 68 - -
Pte6g01178 195 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 85 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pte6g01178 195 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 47 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01178 Pte-Chr6 29966823 29972549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01178 1 187 MYB Transcription Factor Family AT3G46130 51.562 3.65e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte6g01178 Myb_DNA-binding 8.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01178 K09422 - qsa:O6P43_028279 229.18