Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g01160 ATGGAGCTTCTAAAGCCTTCATTCCCACTTCCCCATGTCTATGCTGAAGATGGCTGTAATGGGTTCTCACCTCCCAATTTCTTATACGGGTTTAAAACTAACATGTCTTCTGCTACTTCTCATTTACCCGGAATCCATGAAGAAGGTTCTGATAAGGTGCACGTAGCAGTAGGAAAGTCAATTGAGAAAGCTGTCATTTTGCTTCAATGGAGTTTCATCCGGTTCCGGGACAATGAAATATGTATACTTCATGTTCATCAACCTTCTTCTACAATCCCTACTCTCTTAGGAAAACTACCAGCAAGTCAGGCAAATAAGGAAGTGTTGCTTGCACATAGGAGACAAGAGAGAGAACGGACAGTGAAGCTTTTAGAAAGTTACATGAGCATTTGCCATGCGGCAAAGGTTAAGCTGAGTATCTGTGTGGTTGAAGCTGACCAAGTCCAAAAAGGGATAATTGATTCAGTCAGCAGATATGGTATTAGGAAACTTGTCATGGGGGCTGAAGTGGACAAGCGTATGAAGGTGAAAAAGAACTCAAGCAAAGCAAATTATGCTGCCAAGAATGCTCCTTCATTTTGCGAAATATGGTGTATTAGCAAGGGGAAACATGCATGGACAAGAGAAGCTTCGGAACCCCCACGTTGCTTGCATACCCAACCGGAGATTACAGCTGCAGGAAATATGAGGTTTAGATCATTTCAGTATGGTAATGAGAAGTTGTATCATCCACAACTTCGCCGATCCAAATCTGCAAGAGCGACAATCTGCACTCGAGATGGCATTTGGATCCAGAGTGAAACACACAAAAGAGAAGCAGATTCATCACCTTCATTATTAAGTCTAAATGGGTTACCTTTCTCCCATCATGCTGAAAGAAAGGAGCGCATTGAGGAAGAAGAATTGGAAGGCCTACTGAGAGAAGCCAAAATGAACGTTGAGGCTGCAACTAACGAATTGTTCTCAGAACTATCCAAGCGCAAAAAGTTGGAGCAAGAAGCTATGGAGGCTCGAAGCAAGGCCATTCTCTGGGAATCTGCTCTTGCACGTGAAGTCGAATTCCGGAATGTGGCTGAGGATTCATTAAGGACTACTATAGAGGAACAAGGGAAGCTATTACATGAGAAAAATGAAGTTTGTCAAGAGCTTGAGAGGACAATGAGAAATGTTGCTCTTCTTGACAGCCGTGCACGTGAAGCAAATCGTAGGCGGGATGAAGTTTTTGGAGAATTATCTATTATTCAGGCATCTATTGCAACTCTATCTCATGAAAAGCAACAAATTAGACGCCAAAAATTAGAAGCTCTCCGTTGGCTGGAGCGGTGGAAGAGCAACGGACAAAATAGATCTGCTAATTGTAATGGATTCTTGGGATTTTTTGAATTGCCTGAGTTAGCAGAGTTTTCATTAGCAGACATTGAAAATGCCACGTGTAATTTTTCTGAGAGTTTTAAAATTGGGAAAGGAGGATATGGCTGTGTTTACAAGGGAGAATTGTTAGGTAGAACTGTAGCAATAAAGAAGCTCCATCCGCATAACATGCAAGGACCATCAGAGTTTTATCAAGAGGTTAAGGTGCTTGGGAGTCTCCAGCACTGTCACCTGGTGACCTTGCTTGGGGTTTGCCCGGAAGCATGTTCGCTTGTATATGAATACCTACCTAATGGAAGTCTTCAGGACCACCTTTCCCAGAAGGGCAACATTTCTCCTGTGACGTGGGATACTCGTGCTCGCATCATAGTGGAAATAGCTAGTGCTCTTAGCTTCTTGCACTCCTCAAAACCTGAAACAATTGTCCATGGTGATCTCAAGCCTGAAAACATACTACTTGATTCTTCCTTCTGCTGCAAAATAGGTGATTTTGGGCTATGCAGGCTGTTGACTGAAGACACGCTTTATTCTGCTAGTTTCAAAAGAAGTTCTGAACCGAAGGGTACTTTTAAGTACATGGACCCAGAGTGTCAGAGATCAGGAATTTTGACGCCAAAGTCTGATGTTTACTCCTTCGGATTAATTATTTTGCAGCTTCTCACTGGCAGGCCTCCAGTTGGATTAGCAGGTGAGGTACGCAAGGCAGTTTCATGTGGAAAATTATCATCAATTGTGGATTCTTCAGCTGGAGATTGGCCTACGCTTGTGGTTACAAGATTAATAGAAATAGGACTGCAGTGCTGTGAATTGAATGGTAGGGCTCGGCCAGAGATGACACCTGCTCTGGTGAGAGAATTAGAGCAATTGCATGTTTCAGAGGAGAGACCAGTTCCACCTTTTTTCTTGTGCCCCATTCTTCAGGAAATCATGCATGACCCTCAAGTTGCAGCAGATGGATTCACTTATGAAGGGGAAGCAATACGTGGATGGTTAGAAAATGGGCATGGAACTTCTCCAATGACGAATTTGAAATTAAGTCATCTGCTTCTAACTCCAAATCATGCATTGCGGTTTGCCATCCAAAACTGGCTCTGTAAATCTTGA 2475 0.4303 MELLKPSFPLPHVYAEDGCNGFSPPNFLYGFKTNMSSATSHLPGIHEEGSDKVHVAVGKSIEKAVILLQWSFIRFRDNEICILHVHQPSSTIPTLLGKLPASQANKEVLLAHRRQERERTVKLLESYMSICHAAKVKLSICVVEADQVQKGIIDSVSRYGIRKLVMGAEVDKRMKVKKNSSKANYAAKNAPSFCEIWCISKGKHAWTREASEPPRCLHTQPEITAAGNMRFRSFQYGNEKLYHPQLRRSKSARATICTRDGIWIQSETHKREADSSPSLLSLNGLPFSHHAERKERIEEEELEGLLREAKMNVEAATNELFSELSKRKKLEQEAMEARSKAILWESALAREVEFRNVAEDSLRTTIEEQGKLLHEKNEVCQELERTMRNVALLDSRAREANRRRDEVFGELSIIQASIATLSHEKQQIRRQKLEALRWLERWKSNGQNRSANCNGFLGFFELPELAEFSLADIENATCNFSESFKIGKGGYGCVYKGELLGRTVAIKKLHPHNMQGPSEFYQEVKVLGSLQHCHLVTLLGVCPEACSLVYEYLPNGSLQDHLSQKGNISPVTWDTRARIIVEIASALSFLHSSKPETIVHGDLKPENILLDSSFCCKIGDFGLCRLLTEDTLYSASFKRSSEPKGTFKYMDPECQRSGILTPKSDVYSFGLIILQLLTGRPPVGLAGEVRKAVSCGKLSSIVDSSAGDWPTLVVTRLIEIGLQCCELNGRARPEMTPALVRELEQLHVSEERPVPPFFLCPILQEIMHDPQVAADGFTYEGEAIRGWLENGHGTSPMTNLKLSHLLLTPNHALRFAIQNWLCKS* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g01160 824 SUPERFAMILY Protein kinase-like (PK-like) 464 749 IPR011009 -
Pte6g01160 824 ProSitePatterns Protein kinases ATP-binding region signature. 486 508 IPR017441 GO:0005524
Pte6g01160 824 Coils Coil 366 403 - -
Pte6g01160 824 SUPERFAMILY RING/U-box 751 823 - -
Pte6g01160 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Pte6g01160 824 CDD RING-Ubox_WDSUB1-like 755 810 - -
Pte6g01160 824 CDD STKc_IRAK 486 746 - -
Pte6g01160 824 Pfam Protein kinase domain 482 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01160 824 Gene3D HUPs 48 192 IPR014729 -
Pte6g01160 824 Gene3D Phosphorylase Kinase; domain 1 458 552 - -
Pte6g01160 824 Gene3D Transferase(Phosphotransferase) domain 1 553 753 - -
Pte6g01160 824 Coils Coil 299 347 - -
Pte6g01160 824 Pfam U-box domain 754 823 IPR003613 GO:0004842|GO:0016567
Pte6g01160 824 ProSiteProfiles U-box domain profile. 753 824 IPR003613 GO:0004842|GO:0016567
Pte6g01160 824 SMART serkin_6 480 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01160 824 CDD STK_N 52 202 - -
Pte6g01160 824 PANTHER OS02G0152300 PROTEIN 53 819 - -
Pte6g01160 824 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 754 824 IPR013083 -
Pte6g01160 824 ProSiteProfiles Protein kinase domain profile. 480 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g01160 824 SMART Ubox_2 757 820 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g01160 Pte-Chr6 29754664 29760809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g01160 51 821 U-box Gene Family AT2G45910 36.875 6.93e-173 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pte6g01160 Pkinase 6.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g01160 - - qsa:O6P43_028239 1066.6